Oncorhynchus gorbuscha (pink salmon): 124012599
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Entry
124012599 CDS
T07892
Name
(RefSeq) elongation factor 1-alpha isoform X1
KO
K03231
elongation factor 1-alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124012599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124012599
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124012599
03012 Translation factors [BR:
ogo03012
]
124012599
04131 Membrane trafficking [BR:
ogo04131
]
124012599
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124012599
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124012599
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124012599
Translation factors [BR:
ogo03012
]
Eukaryotic type
Elongation factors
124012599
Membrane trafficking [BR:
ogo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124012599
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
124012599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
124012599
NCBI-ProteinID:
XP_046182352
LinkDB
All DBs
Position
LG24:27669592..27677277
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGANGVTLLEALDSILPPSR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGTISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAVKAAKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccgggaag
tcaaccaccaccggccatcttatctacaaatgcggaggcattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggcaaaggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgagagcgtggtatcaccatcgacatttccctgtggaagttt
gagaccgccaagtactacgtcacaatcatagatgcccccggacacagagacttcatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctcctggcc
tacactctgggagtgaagcagctcatcgttggcgtcaacaagatggactccacagagccc
ccttacagccagaagcgttttgaggagatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccaccgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaagccagccctaacatgggctggttcaagggatggaaggttgagcgtaaggag
ggtggcgctaatggtgtgacccttctggaggctctggactctatcctgcccccctcccgc
cccaccaacaagcctctccgtctgcccctgcaggacgtctacaaaattggaggtattgga
acagtgcccgtgggccgtgtggagactggaaccctgaaggccggtatgattgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaatgtcggattcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaacgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccacccgggcaccatctcccagggctatgcccccgtg
ctggattgccataccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaggccctgaagtctggagacgccgcc
atcatcgtcatggtgccaggaaagcccatgtgtgtggagagcttcgccgcctaccctccc
ctcggtcgttttgccgtgcgtgacatgaggcagaccgtggctgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtccgccgttaaggctgccaaa
gctaaatga
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