Oncorhynchus gorbuscha (pink salmon): 124012630
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Entry
124012630 CDS
T07892
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
ogo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124012630
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124012630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124012630
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124012630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
124012630
NCBI-ProteinID:
XP_046182422
LinkDB
All DBs
Position
LG24:complement(50169769..50198670)
Genome browser
AA seq
1407 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQQSGLISRVTDTVKSIVPSWMQKYFTNGEAAEGG
GAMLGGEPTSQAPPNGSEEVDPLPDGQDSAEPATSNTEPSTSRVSLNFQDVLSRPPLNRS
HLHFPSLDSTPALGSPSSLFSQPSTSSAPFAGGPFAGASTSFSLVKEIKDNSSQHEDDNI
STTSGFSSRASEKDVPNFKTTSLPQLCSPEMDRPQQSQSSLKKPAFNLSVFGTSSTSTLN
SSVLNSSQLGDSPFYPGKTTYGGAAAVRTARSRTATPYQAPLRRQIKAKPAGAPPCGVTS
ATARRILQSLERMSSPLADAKRIPSTVSSPLSKFPDGSTLDLSHFQAPKKRLDSPLPPVQ
KLVIPAAALVSGSRPMSFRPSLTPRGLTQTPVGTPTRQSPLIPEAVAYPCQSTSSSSLST
YPLSSTSATSSTGSGGGKMKRERTSTRPSSKQPEDEIAELPALPANTSISLPSFSFPNPK
PVVTTTPVLVEPVTNEVPPTTAPATPPSTPFTFSSPIVMTTAASPPSFSPSSGFTFSAPV
VKTGLSLSNGKMVTPVVAAVKHAASESMEEFEGPFKPAKMLKQGSVLELLKGPGFAVPVT
RTSPVPKATRETPALSTAPSLGDLFKAPTGSWDCDVCMVRNKPTATKCVACMTPHPNSTL
AKTDSEHFTTLSGLEGSTTTSAAGFGALFTKSAGSWDCDTCLVQNKPQAVKCVACETAKP
GSGVKATLTLHAFSEAKTLPAAAPFLGFGDKFKKPEGAWECDMCMVQNKAQDIKCVSCTS
TKPGVTAATQSLTPAPVSITPLLGFGAQFKKPDGAWECDVCCVQNKGADQACVACQTPKP
GALVEPKAFGSSSFGIQSLSDTCSGGFKFGMGVSSDSASGSGGFKFGGTLSDSSSGGFKI
GAAASSDTTSDTSSSAGFKFGSSTEGFKFGASTASTPAADEGRKAEAPSMGAGFKFGISG
GISFGTTAAASTESKPSDGGFSFGLSKPTTTTSTLSLPVSTENDSGASTETTTTASAPIF
GKLAEPPTLATPLGGSIFEELLEKDKDPFTFGKPEKEASMGSGFLFSAASKGAEASAPPG
GFSFFMVDPSADQPKAPTFTFGKLADSETPAAKAPKPSFSFGQSATDAAASKPVFGFMST
TTTSTSTTPAPRLFGPTSSTTPAPIPDPSTFLFGQSASSEATPAKSFLFGQSQDSLPAPA
ASLNPGPAQPFLFGSGPNTAAPSFAFGAAPLSTALSTAPSAAPAQFVFSPASSSGFGSGQ
APTFGQGTSQPNAPAFGSPAPSPFSATASQPPAFGGKANSVPVFDHQANSTPAFGSSTPA
APGGGFQFGGVGAFGTSSNSTGVFAFGGVPGGSPASSATPSMAPQPSAPGGGFNFIGSTK
STTFTAAPAGQNSIARRKIKTAVRRKK
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacgggtggagggaaaattagaagcagaagatatcatatcgcttcaaaacct
tacgccaaaagcaaacagcagcagtccggcctgattagtcgagtgacagacacagtcaag
agcatcgttccttcttggatgcaaaaatacttcacaaacggggaggctgcagaaggggga
ggggccatgttgggtggggagccgaccagtcaggcccctcctaatggcagtgaggaggta
gacccccttcctgatggacaggactctgcggagcccgctaccagtaatacagagccttcg
acaagcagggtatccctgaacttccaggatgttctgtcgaggccccccctcaatcgctcc
cacctccatttcccctccctggactccacaccggccctggggagcccgagctcccttttc
tcccagccctccacctcctccgcccccttcgctgggggccccttcgctggggcgtcgaca
agcttctccctagtgaaggagatcaaggacaatagctcccagcacgaggatgacaatatc
tccaccaccagtggcttctcatcacgcgcatcagaaaaagatgtaccaaactttaagacc
acgtcgctaccccagctctgttctccggagatggaccggccccagcagtcccagtccagt
ctcaagaaacctgcattcaacctgtctgtctttgggacttcctccacttccacgttgaac
agttcagtgctgaactccagtcagttgggggattcccccttctacccagggaagactacc
tacgggggagcagctgctgttagaacagcccgctcacgcacagccacaccttaccaggct
ccattgcggagacagatcaaggccaagcctgctggggctccgccctgtggggtgaccagc
gctactgcccgacgcatcttgcagtccctggagcgcatgtccagccccctcgctgatgcc
aagagaatcccctctacggtgtcctctcccttgtcaaaattccctgatggcagcactctg
gacctttcacatttccaggcccccaaaaaacgactggactctcccctccccccagtccag
aagttggttatcccggctgcagcgttggtgtctgggagccgcccaatgtccttcaggccc
tctctgacccccaggggcctgacccagacccccgtaggcacgcccacaagacaatcccct
ctgattcctgaagcagtggcatatccttgtcaaagcacaagcagcagcagcctgtccacc
taccctctgtccagcacttctgcaaccagcagcacagggtcaggaggagggaagatgaag
agggagaggaccagcacaagaccctcgtccaaacaacctgaagacgagattgctgagcta
ccggccctgccggccaacacctcaatcagtctgcccagctttagcttccccaaccccaag
cctgttgtcactaccacacctgtcctggtggagcccgtcactaacgaggtgccaccgact
acagcacccgccacccctccctccacacctttcactttctcctcccctattgtcatgaca
actgctgctagcccaccatccttttccccgtcttctggatttaccttcagtgcacctgta
gtgaaaactggtctgtcactatccaacgggaagatggtcaccccagtagtggcagcagtg
aagcatgctgccagtgagagcatggaggagtttgaagggccgtttaaaccagccaagatg
ttgaaacagggcagtgtgctggagctcctcaaaggacctgggtttgccgttcctgttact
cggacctcccctgtccccaaagccacccgggagaccccagccctgtccactgccccctcc
cttggggacttgttcaaagcgccaacaggctcctgggactgtgacgtctgcatggttagg
aacaaacccactgccacaaagtgtgtggcctgtatgaccccacatccaaactctacttta
gcgaagactgacagtgaacacttcacaacgttgtccgggctggagggttccaccaccact
agcgctgctggttttggagccctgttcacaaagtctgcgggaagctgggactgtgacact
tgtctggttcagaacaagcctcaagcagtcaaatgtgtagcctgtgagacagccaagcct
gggtctggagttaaagccacactgactctgcatgccttctcggaggctaagactctgccc
gctgctgcccccttcttgggcttcggggacaagtttaagaagccggagggagcgtgggag
tgtgacatgtgcatggtgcagaacaaggcgcaggacatcaagtgtgtttcctgtacgagc
actaagccaggagtgacggcagcgactcagtctctaactcccgcccctgtcagcatcact
cctctactaggctttggggcccagttcaagaagccagatggagcgtgggagtgtgacgtg
tgctgtgttcagaacaagggagcagaccaggcgtgtgtggcctgtcagacccccaagcct
ggggctttagtagagcctaaagcattcggttcctcgtcgtttggtatccagtccttgtct
gacacctgctcagggggattcaagtttggcatgggggtgtcatcggactcggcctctggt
tctgggggcttcaaattcggcggcaccctctctgactcctcttcagggggcttcaaaatc
ggtgcagctgcctcatcagacaccacctcagacaccagtagctctgcaggcttcaaattc
ggcagctccacagagggcttcaaatttggagcatctactgcttccacccctgcagcggac
gaggggaggaaggctgaagccccgagtatgggtgccgggttcaaatttggcatcagcggt
gggatctcgttcggcactacagcagccgctagcacggagagcaaaccctcggatggaggg
ttctcctttggactatcaaaaccgacaaccaccacctctactttaagccttcctgtctct
acagagaacgacagtggagcttctacagaaaccaccacaacagcatcagctcctattttt
gggaagctggccgagcctcctaccctggccacaccactagggggcagcatatttgaggaa
ttgctagagaaagacaaggaccctttcacctttgggaagcctgagaaggaggcctctatg
gggtctgggttcctgttcagtgctgctagtaaaggggcggaggcatcggctccccctgga
ggcttttccttctttatggtagacccatctgcagaccagcccaaagcacctaccttcaca
tttgggaagctggcagacagtgagaccccagcagcaaaagcccctaagccctcattcagc
tttgggcaaagcgctacagatgctgcagcctcaaagccagtgtttggatttatgtcaacc
accaccacctctacttctaccacccctgcccccaggctgtttgggcccaccagcagcact
accccagcccctatcccagaccccagtaccttcctgtttgggcagagtgcctccagtgag
gccaccccagccaagtccttcttgtttgggcagagccaggacagcctgcctgcccctgca
gcttccctgaaccctggcccggctcaaccattcctgtttggctctggacctaatactgct
gctccctccttcgcttttggagcggcaccgctctccactgccttatctacagctccatca
gcagcccctgctcagtttgtattcagccctgcctcatcctctggctttgggtcgggacaa
gctcctacctttggtcagggtacctcccagcccaatgcccctgcgtttggttctcccgcc
ccgtcccccttctctgccacggcctcccagccccctgccttcggggggaaagccaactct
gtccctgtgttcgaccaccaagccaactccacgcccgcttttggctcatccacccccgcc
gcaccaggtggaggtttccagtttggaggagtcggtgcgttcggcacgtccagtaacagc
acgggggtgtttgctttcggaggggtaccaggagggtcccccgcctcttctgccacgccc
tccatggcaccccaacccagtgcacctggaggtggctttaactttattgggtcaacaaag
agcaccaccttcactgcagcccctgcaggacagaactcaatcgctagacgcaagatcaaa
acagctgtccggcgtaagaagtaa
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