KEGG   Oncorhynchus gorbuscha (pink salmon): 124012664
Entry
124012664         CDS       T07892                                 
Name
(RefSeq) syndecan-3-like isoform X1
  KO
K16337  syndecan 3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514  Cell adhesion molecule (CAM) interaction
ogo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    124012664
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124012664
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ogo00535]
    124012664
Proteoglycans [BR:ogo00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   124012664
SSDB
Motif
Pfam: Syndecan SDH8 GAP45
Other DBs
NCBI-GeneID: 124012664
NCBI-ProteinID: XP_046182483
LinkDB
Position
LG24:complement(42971142..43024249)
AA seq 429 aa
MKLPRCLMTILAALLAHSALGQTWVPSIDLEGSSGDEFYDDEDLFSGSGSGFPEMKVNPT
AVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERVREMERERDREREREKEREREKERERERERERQREIERERERERERARAAQTTIS
PRGPAAVPMATTSTATPLAESVAPSSGVQDLITTEEEDEDVYLSPDPTTSMPMETTTEEE
EEEEVTTTDTETTPLPKTTAPPTTIGPALTERSSSTPFRPSVLVTTPIKAAPTERSTRPQ
QPSTTMNNELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGNTINTGSSAAQ
LPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQK
ADKQEEFYA
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgaagctgccgcggtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaaggttcttctggagatgagttctatgat
gatgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccctaca
gcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggctact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctcccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agggaaagagagagagtaagggagatggagcgggagagggatagagagagggagagagaa
aaggagagggagagagaaaaggagagggagagagaaagagagagagagaggcaacgggaa
atagagagggaacgagaaagagaacgtgaaagagcgagagccgcccagaccaccatctca
ccccgtggcccggcggctgttcccatggcgaccaccagcacagcgacgcctctggcggag
agtgtagcaccctctagtggcgtgcaggacctgatcaccacagaagaagaggacgaggat
gtctacctgtccccagaccccaccaccagtatgcctatggagaccaccacggaagaagaa
gaagaggaagaagtgaccactacagatacagagaccacacccctcccaaagacaacagct
ccacccactacgattggcccagccctaactgagaggtctagctccaccccctttaggccc
agtgttctggtgaccacgcctattaaagccgcacccacagagaggagcacacgcccacag
cagccttctacgacaatgaataatgaattaggggttaatggacccagtggagactttgag
atccgggaggaggaccgtcgccagggcaacgaggttgttggtcgtggccttggcatggag
actggggcagaacctgatctgattggcaacacaattaacacaggaagttctgccgctcaa
cttcctcagaagaacatcttggagaggaaggaggttctgatagcggtgatagtggggggc
gtggtgggggccctgtttgcagcgttcctggtcatgctgctggtgtacaggatgaagaag
aaagatgaaggcagctacacactggaggaacccaagcaagccaccgtcacctaccagaaa
gctgacaaacaggaggagttctacgcataa

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