Oncorhynchus gorbuscha (pink salmon): 124012664
Help
Entry
124012664 CDS
T07892
Name
(RefSeq) syndecan-3-like isoform X1
KO
K16337
syndecan 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124012664
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124012664
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ogo00535
]
124012664
Proteoglycans [BR:
ogo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
124012664
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
GAP45
Motif
Other DBs
NCBI-GeneID:
124012664
NCBI-ProteinID:
XP_046182483
LinkDB
All DBs
Position
LG24:complement(42971142..43024249)
Genome browser
AA seq
429 aa
AA seq
DB search
MKLPRCLMTILAALLAHSALGQTWVPSIDLEGSSGDEFYDDEDLFSGSGSGFPEMKVNPT
AVGVSFSTEEPLPLSTTQATGPAPSAPPAAEPNPNPDALPTPLPTEGEGESGIEWERGRE
RERERVREMERERDREREREKEREREKERERERERERQREIERERERERERARAAQTTIS
PRGPAAVPMATTSTATPLAESVAPSSGVQDLITTEEEDEDVYLSPDPTTSMPMETTTEEE
EEEEVTTTDTETTPLPKTTAPPTTIGPALTERSSSTPFRPSVLVTTPIKAAPTERSTRPQ
QPSTTMNNELGVNGPSGDFEIREEDRRQGNEVVGRGLGMETGAEPDLIGNTINTGSSAAQ
LPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQK
ADKQEEFYA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgcggtgtctgatgacgatcctcgcggcgctgctcgctcactccgcgctg
ggtcagacctgggttccgtctatagatctagaaggttcttctggagatgagttctatgat
gatgaagacctcttctcaggctctggatctggctttccagagatgaaggtcaaccctaca
gcggtgggtgtgtctttcagcactgaggagccccttcccctttccaccacccaggctact
ggccccgccccctcagccccacctgcagccgagcccaatcccaaccccgacgctctcccc
accccactacccactgagggagagggggagagtgggatagagtgggagagagggagggag
agggaaagagagagagtaagggagatggagcgggagagggatagagagagggagagagaa
aaggagagggagagagaaaaggagagggagagagaaagagagagagagaggcaacgggaa
atagagagggaacgagaaagagaacgtgaaagagcgagagccgcccagaccaccatctca
ccccgtggcccggcggctgttcccatggcgaccaccagcacagcgacgcctctggcggag
agtgtagcaccctctagtggcgtgcaggacctgatcaccacagaagaagaggacgaggat
gtctacctgtccccagaccccaccaccagtatgcctatggagaccaccacggaagaagaa
gaagaggaagaagtgaccactacagatacagagaccacacccctcccaaagacaacagct
ccacccactacgattggcccagccctaactgagaggtctagctccaccccctttaggccc
agtgttctggtgaccacgcctattaaagccgcacccacagagaggagcacacgcccacag
cagccttctacgacaatgaataatgaattaggggttaatggacccagtggagactttgag
atccgggaggaggaccgtcgccagggcaacgaggttgttggtcgtggccttggcatggag
actggggcagaacctgatctgattggcaacacaattaacacaggaagttctgccgctcaa
cttcctcagaagaacatcttggagaggaaggaggttctgatagcggtgatagtggggggc
gtggtgggggccctgtttgcagcgttcctggtcatgctgctggtgtacaggatgaagaag
aaagatgaaggcagctacacactggaggaacccaagcaagccaccgtcacctaccagaaa
gctgacaaacaggaggagttctacgcataa
DBGET
integrated database retrieval system