Oncorhynchus gorbuscha (pink salmon): 124012685
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Entry
124012685 CDS
T07892
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03250
Viral life cycle - HIV-1
ogo03272
Virion - Hepatitis viruses
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124012685
03272 Virion - Hepatitis viruses
124012685
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124012685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124012685
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124012685
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
124012685
Exosome [BR:
ogo04147
]
Exosomal proteins
Proteins found in most exosomes
124012685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
DUF2226
COG3_N
Motif
Other DBs
NCBI-GeneID:
124012685
NCBI-ProteinID:
XP_046182511
LinkDB
All DBs
Position
LG24:complement(43242835..43272251)
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AA seq
887 aa
AA seq
DB search
MATFISVPLKKSSEVELVKPLSKFVTATYPTGEDQAEYIRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNGAALASQIASEQNLDSDEGLKAAAKYYQLASGAFGHIKDTVLSALNREPTMDISP
ETVGTLSLIMLAQAQEVFFLKATSDKMKDAIIAKLANQAADFYSDAFKQCQYKENLPKCI
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKQFGEEIARLQHASELVKTVASRYDEYVS
VKDLSDKISRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKATTITPPLSAKFTDLFE
KMVPMAVQQSMSVYSQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IIEKAHAIVQQGGLQSIEQLIRDLPELLTRNREILDESLKMLDDEESTDSELRSKFSQRW
NRTPSGDLYKPLRAEGGNFRSVLDKAVQADQVVRERYNAHCEMIALLCKPEAELTAAIPS
ANPAKTLQGSEVVSVLRSQLSQLEVVKREREVLETEIKGVTFDMSSSFLTALAQDGAINE
EALSMSQLDQSYGSYSQRVQASLRSQEELLGNVQASHQEFSSLKQSNSEANDREEVLKKL
ASAHDSYVEITSNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFSVPAYQTNPTPTATGPTPAPRTVFQPQQPQAKAQPPERPPPPAFTPQAASAPGN
PPSNQPQPVNPPPMAPPSQAQGPPYPTYQGYPGYAYQMPMGYNPYAAYGQYNMPPTMQPN
MQPYVPYQQAPAPGQGGYPVVPPTQQHPYTYQQQPQQPPQQPYYPQQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttctgtcccgttaaagaagtcgtctgaagtcgaactagttaaaccg
ctctcgaaattcgttacggcgacatacccaacgggcgaggatcaagctgagtatatccga
tccgtggaggagttgaacaagctgcgcaagagtgctctggggaggccgctcgacaaacac
gaaagctcgctggaaatcctcctgaggtattatgatcagctgtgtgccgtggagccaaag
tttcccttctctgaaaaccagctgtgtctaaccttcacatggaaagatgcctttgataag
ggctcactgttcggcggctcagtcaaactagccctggccagtctgggctatgagaagaca
tgcgtgttgttcaatggagcagcgttggcaagtcagatcgcttcagaacaaaacctggac
agcgatgaaggactgaaggccgcagccaaatactaccagttggcaagtggagcatttggt
cacattaaggacacagtgctgtcggctctgaacagagagcctacaatggacatttctcct
gagaccgtaggaaccctcagtctcatcatgctggctcaggcacaggaagtcttctttctc
aaggctacttcagataagatgaaggacgccatcatcgctaaactggccaatcaggcggca
gatttctacagcgatgccttcaagcagtgtcagtacaaagagaacctgcccaagtgtatt
tatttccaggaggtgttgccggtgctggcagctaaacactgcatcatgcaggccaacgct
gagctacaccagtctatcctcgccaagcagaagaaacagtttggggaggagattgctcgc
ctgcagcatgcttcagagctggtgaagacggtagcgtctcgctatgatgagtacgtcagt
gtgaaagaccttagtgataagatcagccgtgctctgaccgcagctaagaaggacaacgac
ttcatctaccacgaccgcgtccctgaggtcaaagacctggaacacatcggcaaggcagcg
ctggtcaaggctaccaccatcacacctccgctcagcgccaagttcactgacttgtttgag
aagatggtgcccatggctgtgcagcagagtatgagtgtgtacagccagaggaaggctgag
accgtcaacagactggtaggaaccatgagggaagctactaacctctgcaacggtgtcctg
gcatctctgaacctgcctgcggctctggaggacctgtctggagattctatcccacaatcc
attattgaaaaggcccatgccatcgtccagcagggggggctgcagagcatagagcagctg
atcagagacctgccggaactactgacacgcaacagagagatcctggatgagtctctgaag
atgctggatgatgaggagtcgacagacagcgagctgagatccaagttcagccaacgctgg
aacagaactccctctggagacctctacaaaccactcagagcggaggggggtaacttccgt
agcgtgttggacaaggcagtgcaggctgaccaggtggtcagggagcgttataatgcacac
tgtgagatgatcgctctcctctgtaaacctgaggctgaactcactgctgccataccttca
gccaaccctgctaagacattgcagggcagtgaggttgtgagtgtgttgcgttcccagctg
tcccagctagaggtggtgaagagagagagggaggtgctggagacggaaattaagggcgtg
acctttgacatgtcctccagcttcctgacggctctggctcaggacggggccatcaatgag
gaggcactgtcaatgagccagcttgaccaatcatacggcagctacagccagagggttcaa
gccagcctccgctctcaggaagagctgttgggcaacgtgcaggcatctcaccaggagttc
tccagtctgaagcagtccaactcggaggcaaatgatcgtgaggaggtgttgaagaagctg
gcctcggcccacgacagctacgttgagatcaccagcaacctcagagagggcaccaagttc
tacaatgacctcaccgagatcctgctgaagttccagaacaagtgcagtgacatcgtcttc
gcccgcaagacagaacgggatgaactgctgaaggatttgcagcagagcatcgccagggag
cccagtgccccgtccttctctgtccccgcctaccagactaaccccacccccaccgccact
ggaccaacccccgcaccaaggactgtcttccaacctcagcagccccaggcgaaggcccag
cctcccgagcggccccctccccctgccttcaccccccaggccgcctccgcaccaggcaac
cctcccagtaaccagcctcaaccagtaaaccccccacctatggcccctccctcacaggcc
cagggaccgccttaccccacataccagggataccccgggtatgcctaccagatgcctatg
ggttataacccgtatgcagcgtacggccagtacaacatgccccccactatgcagcctaac
atgcagccctacgtcccctatcagcaggccccagcacccggacaggggggctaccctgtg
gtcccccccacacagcagcacccctacacctaccaacagcagccccagcaaccaccacaa
cagccatactacccacaacaataa
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integrated database retrieval system
