Oncorhynchus gorbuscha (pink salmon): 124012791
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Entry
124012791 CDS
T07892
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124012791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124012791
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124012791
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
HECT type E3
124012791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
124012791
NCBI-ProteinID:
XP_046182709
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All DBs
Position
LG24:complement(14225120..14236219)
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AA seq
1015 aa
AA seq
DB search
MISWGEDCRKGFGLVKPNGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRLVS
VARIQEDQDGRRFTGKLKSVTCKERIRALSCGDSHAVLLSEEGRVLCLDKANILSPLGNL
CNRQVTQVACGGQHSILLTQDGQVFTWGQNTSGQLGLGWGEPRDMSMSPKPLKSLSGIPL
VQITAGGEHSFALSLSGAVFGWGKNTAGQLGLGDTTNRCAPAHVDCLNLKKTVLISCGGE
HTAILTKGGVVFTFGSGCYGQLGHNSLRDELRPRVVGQLCGLKVTQIACGRHHTLAFVGP
SNKIYSFGRGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFALCTLGQES
EEMPNNLRSSVGKVTQQAIDEEIIDKWNSECDSKSWKKGQKEITKMFSSASCLNGSFLDK
SCDKHYQTSPKQSGLDFSLVQGAFRKLVKKDKVLTEVEAVVQHTLLPSLYEEPIGVEGLR
VYLVLPELLRVLHKQHRRTDLTEAVAAAILRLHPEKLQVLGDCWSSLKPSVMTKHIGVWK
KALSGILRSKHILRTRDTGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNTIFL
AEDVKLWRLWSKQDVDQTPAIFCCYPFLMNLQSKINVFNINAALTKNPPNNPQRTGMWPY
DMFLVAAPAPVFELRLNRASLIEDTFHQLSVAYHSTFKRSLVVYFDEDAKLTDVYKRDFF
LHLFDKLLVPESGMFMYNDTNTLAWFPAMPRVEKKRYFLFGVLCGMALYNNNMVHLPFPM
AFFKKLVNIKPSLEDLREFSPIEAGSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKE
TGKLVTSANKKEFVDTYVNHIFNQSVEVVFEEFRKGFFKVCDKDVVEFFQPEELRGVMVG
KENFDWETLKQNTVYLGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMN
QIRMRVQTLPNSSQQHFPEALTCHSLLQLPIYPSKETLQSRLIEAVGHNRGFWNE
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggattgtcgtaaaggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagattcacagggaaactgaagagtgtg
acatgtaaggagaggattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggtcgggttctctgcttggacaaagccaacattctcagcccattgggtaaccta
tgtaaccgacaggtaactcaggttgcatgtggaggccagcattcaattttactaactcag
gatggtcaggttttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagccacgcgacatgtccatgtcccccaagcctctgaagtctctatcagggatacccctg
gttcagatcactgcagggggagaacacagcttcgctctgtccctttctggagctgtgttc
ggctggggcaagaacaccgccgggcaactgggactaggggacacaacaaacagatgtgct
ccagctcatgttgattgcctgaatctgaagaagacagttttgatttcatgtggaggagaa
catactgccattctgacaaagggtggtgtggtgttcacatttggctcaggctgctatgga
cagcttggacacaactctctccgagatgaactacgacctcgagtggtggggcaactttgt
ggattaaaggtgacccagatagcatgtggaagacaccacacattagcatttgtggggccc
tccaataagatctactcatttgggcgcggagagcaagggcagctgggaaatggagtaaag
attgatcagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaatt
gaacacatttttgctggaggaaaccattcctttgcgttgtgcactcttggtcaggagtct
gaagaaatgcctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagac
gaagaaatcattgacaaatggaactcggaatgtgattcaaagtcttggaaaaaaggacag
aaggaaatcacaaaaatgttttcttctgcatcgtgtttaaatgggagctttcttgataaa
agttgtgacaaacattaccaaacctcaccaaaacagtctggcctggatttttcactcgtc
caaggcgcattccggaagctggtgaaaaaggacaaagttttgactgaggttgaagctgtt
gtccagcacacactacttccctccctgtatgaggagcccattggagtggagggcttgagg
gtctacctggttctccctgagctcctgagggtccttcacaaacagcacagaaggacagat
ctcaccgaagctgttgctgctgctatcctcagactgcaccctgaaaagctgcaggtcctc
ggtgactgctggtcctcattgaagccgtctgtcatgaccaagcacattggggtgtggaag
aaggccctgtcggggattctgaggagtaaacatattctacgcactcgtgatactgggatc
aagcacctgctccaggtcctcggccatctccacagagcaaaccagaaatccgtagagacc
cagactgttccagacagtaccttttgtatggaggaagttcacttcaataccatatttcta
gcggaggatgtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgcc
atcttttgttgttacccattcttgatgaatctgcagagcaagataaacgtttttaacatc
aacgccgcactcacaaagaatccccctaacaatccccaaaggactggcatgtggccttat
gacatgttcctcgtggcggcgcctgctccggtctttgagctgagactgaatagagcatca
ctcatcgaagacactttccatcaactgagtgtagcatatcacagtaccttcaagaggtcc
cttgtggtgtatttcgacgaggacgcgaagctgacagatgtctacaaaagggacttcttc
ctccatttgtttgataagctgttggtacccgagtctgggatgttcatgtacaacgacacc
aatacgctggcctggttccctgcaatgcctagagtggagaagaagcgttatttcctgttt
ggggttctgtgtgggatggccctgtacaacaacaacatggtgcacctccccttccccatg
gccttcttcaagaagctggtgaacatcaagccctctttagaggacctgagagagtttagc
cccattgaagcagggagtttgcagtacatcttggattaccctgatgatgatgttgaaaac
atggacatgactttctcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaa
actggaaaactcgtcacaagtgccaacaagaaggagtttgttgacacctatgtgaaccac
atcttcaaccagtcagtagaggtggtgtttgaagagttcaggaaaggcttcttcaaggtg
tgtgacaaggacgtggtggagttcttccagccagaggaactgaggggagtgatggtgggg
aaggagaatttcgactgggaaacgctgaaacagaacactgtgtatttaggagagtaccat
gctgggcatcccaacatcgtcacattctgggaggtgtttgaggaactgacagaggatcaa
aagaaagcgttcctgttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaac
cagatcaggatgagggtccaaacccttcccaactcctcccaacagcatttcccagaggcg
ctgacctgtcactctctgttgcagctgcccatctacccctctaaagagacactacagagc
aggcttatagaagctgttggccacaacagaggcttctggaatgaataa
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