Oncorhynchus gorbuscha (pink salmon): 124012809
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Entry
124012809 CDS
T07892
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124012809 (ssrp1b)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124012809 (ssrp1b)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
124012809 (ssrp1b)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
124012809 (ssrp1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124012809
NCBI-ProteinID:
XP_046182734
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All DBs
Position
LG24:complement(12518210..12542041)
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AA seq
706 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSSKTGKVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTDFEKISEYFKAHYKVELSEKELCVKGWNWGTTKFSGPLLS
FEVSDSPAFEIPLASVSQCATGKNEVTLEFHQNDEAEVSLMEVRFYVPPGDTATTEEGPE
PVEVFRDRVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPY
TTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILLFSKEEDLSLSLNMTEEEVER
RYGGKLSKNMSGSLYEMVGRVMKALVNKKITVPGNFLGHSGTQCITCSYKASSGLLYPLE
RGFVYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETKQGTQFTFSSIEREEYGKLFD
FVTAKKLSIKNRGFKEKKGIKGKDDMLEDSDEDQHDAYLERMKEEGKIREEANDSDDSDG
ESDESFNPGEEEDDIAEEYDSKASASDSSAEGGDGDREKKKRPAKKAKVVKERKPRKKKP
KDSGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGEMWRELGKEQKVEWDGKAE
EAKKDYEVAMREYRESGGGSSAPSKKERKKKRGKSDEKKKKGTSGGGRERERERTTGNDS
FKSREFISSEESSSESDRGKGKRKRKGSDDLEEVASTPPSSDSGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacactggagttcagtgacatttaccaggaggtcaaagggtcatggaatgac
ggccgtctgcggttcggtagacagagtgtggtgtataagagcagtaagacagggaaggtg
gacagcatcccagctgcggagctgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccgggcacatctacaaatatgatggcttcagagacacg
gactttgagaagatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gaattgtgtgtgaagggttggaactggggcaccaccaaattctctggccctctcctgtca
ttcgaggtgagcgacagcccagcgtttgagatccccctggccagcgtgtcccagtgcgcc
acggggaagaacgaggtgacactggagttccaccagaacgatgaggcagaggtgtcgctg
atggaggtccgcttctatgtcccgcccggggacactgccaccacggaagaggggccagaa
cctgtggaggtgtttagagaccgtgtgctgtccaaggcagatgtgatccaggctacagga
gatgctgtgtgtatcttcaaagagctgcagtgtctcacacccaggggcaggtatgatatc
cgtatctacccgagcttcctccacctccacggtaagacatttgactacaagatcccctac
accactgtgctacgtctcttcctgctaccacacaaggaccagagacagatgttcttcatg
atcagtctggacccgcccattaaacaggggcagacacgttaccacttcctcatcctgctc
ttctccaaggaggaggacctcagcctctccctcaacatgacagaggaggaggtggagagg
cgttatggggggaagctcagtaagaacatgtcaggttctctctatgagatggtcggcagg
gtgatgaaggctctggtcaacaagaagatcaccgtgccaggaaacttcctgggtcactcg
gggacccagtgtataacgtgttcctacaaagcgtcgtcaggcctgctctatcctctggag
aggggtttcgtctacatacacaagccccccgtacacctgcgcttcgaggaggtgtcgtgt
gtgaacttcgccagaggcaccaccaccacgcgctccttcgactttgagatcgaaaccaag
cagggcacccagttcaccttcagcagcattgagagagaggagtatgggaagctttttgac
tttgtgacggccaagaagctcagcatcaagaacagaggattcaaagagaaaaagggtata
aagggtaaagatgacatgttggaggactcagacgaggaccagcacgatgcctacctggag
aggatgaaagaggagggcaagatcagagaggaggccaatgacagcgatgactccgatgga
gagagcgatgagtcttttaaccctggagaggaggaagatgacatagcggaagagtatgac
agtaaggcatcagccagtgacagcagtgcagaggggggagacggtgacagagaaaagaag
aagagaccagccaagaaggccaaagtggtgaaggagaggaaaccacgcaagaagaagccg
aaggacagtggcgcccccaagaggccgatgagcgcctatttcctgtggctgaacgcgagc
cgcgagagcatcaaagcagagcaccctgggatatccatcacagagatctccaagagggcc
ggggagatgtggagggaactggggaaggagcaaaaagtggagtgggatgggaaagcggag
gaggcgaagaaggactatgaggtagcgatgagggagtacagagagagtggaggaggatcc
tctgccccctccaaaaaggagaggaaaaagaagagagggaagagtgatgagaagaagaag
aaggggacgtctggtggagggagggagcgagagagggagaggacaacaggaaatgacagc
tttaagagcagggagtttatctccagcgaagagagctcctcagagtcagacagaggcaag
ggcaaacgcaaacgcaagggttcagatgatctagaggaggtggcctcgaccccacccagt
tctgactcaggatcagactga
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integrated database retrieval system
