Oncorhynchus gorbuscha (pink salmon): 124012845
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Entry
124012845 CDS
T07892
Symbol
sox4a
Name
(RefSeq) transcription factor SOX-4a
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124012845 (sox4a)
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124012845 (sox4a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124012845
NCBI-ProteinID:
XP_046182797
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Position
LG24:complement(58985982..58989983)
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AA seq
386 aa
AA seq
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MVQHMRHTESTDSFSPRGDGTDTGDMDLDMDASPTPGSPLSSTGGDRGNVAWCKTPTGHI
KRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDTDKIPFIQEAERLRLKH
MADYPDYKYRPRKKVKTPSSKTERGERGEKGADRSRGSKSSSKRGSGSRGNSRVPKPGQG
SVKLPTQGQECASPADHHTLYKSRSVTGARQIPDKPARRSYMFSGGGSLDSGPPSVGVPG
SPALSSSSESCDPMSLYEEQATGANDALSSNPSTSSPSSAVRLRYTRASSPTPSASHSSS
SSLSSSSDEELEDERFELQPSPGFESMSLGSMGPCESELDRDLDWSFGECGAGSHFDFPD
YCTPEVSEMISGDWLESTISNLVFTY
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcacatgagacacacagagagcacagattcattctctcctcgtggggacggc
accgataccggagatatggacttggacatggacgcgtctccgactcccgggtctccgcta
tcctccacgggaggggaccgaggcaacgtcgcctggtgtaaaacccccacgggacacatc
aagagaccgatgaacgcatttatggtgtggtctcagatcgagaggagaaagatcatggag
cagagtccggacatgcacaacgctgagatttccaagcggctgggcaagcgctggaaactg
ctcaaagacacagataagatcccgttcatccaggaagcagagcggctgagactcaagcac
atggccgactatcctgactacaagtatcggccacggaagaaggttaagacgcccagctcc
aagacagagcggggggagaggggagagaaaggcgcggataggagcaggggttctaagtcc
tcatcgaaaagaggctctgggtctagggggaacagcagagtgcccaagccgggacagggg
agcgtcaagctgcctacccaggggcaagagtgtgcgtctcccgcggatcaccacacgctc
tacaaatccagatcagtgactggtgcccggcagataccagacaagccagcaaggcgcagc
tacatgtttagtgggggagggagcttggacagcgggccaccctctgtgggagtcccaggg
agtcccgccctgagcagctcgtctgagtcctgtgacccgatgagcctgtatgaagagcag
gcgacgggggcgaacgacgcactttcctccaacccttcaacatcctcaccatcatcggca
gtccgcctcaggtacacacgtgcgtcctctccaaccccgtccgcctctcactcctcttcc
tcctccctctcttcttcctcggatgaagagctggaggatgagcggttcgagctacagccg
agccccgggtttgagagcatgtctctgggcagcatggggccatgtgagtcggagctcgac
agggacctggactggagcttcggcgagtgtggggcgggatctcactttgacttccccgac
tactgcacccccgaggtcagcgagatgatctcgggagactggctggagtccaccatctcc
aacctcgttttcacttactga
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