Oncorhynchus gorbuscha (pink salmon): 124012859
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Entry
124012859 CDS
T07892
Name
(RefSeq) TBC1 domain family member 9-like
KO
K19951
TBC1 domain family member 8/9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124012859
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124012859
Endosome - Golgi transport
Rab GTPases and associated proteins
124012859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
124012859
NCBI-ProteinID:
XP_046182819
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All DBs
Position
LG24:complement(3097187..3125517)
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AA seq
1291 aa
AA seq
DB search
MWVHPEEVLQAGALWITERANPYFILQKRKGHGDGRGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLIYWIIAHGCSRKEITEHWEWLEQNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVKEDDDTDKFKEAICTFRKLFGMPEEEKLVNYYSCSYWKGHVPRQGWLYLSI
NHICFYSYLLGKEAKLVIRWADITQLEKSATLLLPDAVKVSTRVAEHVFSVFLNINETFK
LMEQLANIAMRQLLDNKGFEQDRSLPKLKRKTLKKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTGCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSS
NFLPSPVSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYFERETTGSVNSSDDEV
YSQQGSLLSSSPQRSSLGSEGSSSEGERQFNLNDNSVPTATQALMTMYRRRSPEEFNPKL
AKEFLKEQAWKNHITEYGQGVCMYRTDKTKDLVLKGIPENMRGELWLLFSGAINEMATHP
GYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGY
CQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPE
LYDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALSVLHANIH
QLLGAKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDDGDPHPEVDIFKLVRSSYE
KFGSIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKEEHL
TSCYWGGTGGSNPTERHDPSLPYLEQYRIDLEQFRGLFSLLFPWAPVNAAHADLLALRFF
RLLDHNGDSLINFREFISGLSVLCHGDLTEKLKLLYKMHVIPEVTHEQEEPDSAFEATQY
FFEDITPETSNGLDPKCKSEKDDGFVRVTFKTEKVKKLHTPDYRHYMRLWNQGTKNKLDN
MKDLPKLNQSQFIELCKTLYNMFSEDAQEQELYHATATVTSLLLEMGEVGKLFCHSKDQE
EQDQDDPEEAKTSGPAQDGGTKPEGVFQQRGQGEGKEKSQARPCGPAKRDGRGEQLSAME
IKLEDSSPKDIGTSSSMLISDDETKDDTSMSSYSVLSGGSHELDDKLHCEDINDDTVLVR
SENRPHGGGNRPHGEGGPHGRDGGLPHSTSIDKDWAITFEQFLASVLTEQALVLYFEKPV
EVAARITNAKNVRKVGYSLLSASDYEISLSG
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgcaccctgaagaggtgttgcaggcgggtgcgctgtggataaccgagcgagca
aatccctatttcatcctccagaaacgcaagggccacggggacggcagaggaggactagcg
ggtctgttggtgggaacactggatgtggtgctggactccagtgctcgagtggccccctac
agaatcctttaccagacacctgactccctaatctactggatcattgctcatgggtgctcc
cgtaaggagatcacagagcactgggagtggctggagcagaacctcctgcagacactgtcc
atctttgagaacgagaatgacatcactacctttgtcaagggcaaagttcagggtattatc
gcagagtacaacaagaaccacgatgtgaaggaggacgatgacactgacaaattcaaggag
gccatctgtacgttccgtaagctgtttggcatgcctgaagaggagaagctggtcaactac
tactcctgtagctactggaagggccatgtgccccggcagggctggctctacctcagcatc
aaccacatctgcttctactcttacctgctggggaaagaagccaagctggtgatccgctgg
gccgacatcacccagctggagaaaagcgccacgctcctcctccccgatgcagtcaaggtg
agcacacgggtggctgagcacgttttctcggtcttcctcaacatcaacgagaccttcaag
ctgatggagcaactggccaacatcgccatgagacagctccttgacaacaagggctttgag
caggaccgctctctgcccaaactcaagaggaagacactcaaaaaggtgtctgccctcaag
agggacctggatgccagagctaagagcgagcgttaccgggccttgttccgtctgcccaag
gatgagaagctggacggacacacgggctgcaccctttggaccccctttaacaagatgcac
atcctgggccagatgtttgtctccactaactacatctgcttcacttccaaggaggagacc
ctgtgcagcctcatcatcccccttagagaggtgacgatagtagagaaggcagacagttcc
aactttttgcccagcccagtgtccatcagcaccaagaacaggatgaccttcctgtttgcc
aacctcaaggaccgggacttcctggtccagaggatctctgacttcctgcagcagaccacc
tccaagatctacttcgagagggagaccaccgggagtgtgaatagctccgacgatgaagtg
tactcccagcagggctctctcctctccagcagtccccagcgaagcagtctgggctcagag
ggctcctcctccgagggtgagcgccagtttaacctcaatgacaacagcgtgcccaccgcc
acccaggccctcatgaccatgtaccgccgccgctcgccggaggagttcaaccccaaactg
gccaaggagttcctgaaggaacaggcgtggaagaaccacatcactgagtacggccagggg
gtgtgtatgtaccgtacagataagaccaaggacctggtgcttaaaggcatcccagagaac
atgaggggagagctgtggctgctcttctccggggcgatcaacgagatggcgacccaccct
ggctactacgaggacctggtagagaagtctatggggaagtacaacctggccacggaggag
atcgagagagacctgcaccgctccctccctgaacacccagccttccagaacgagatgggg
atcgctgccctacgaagggtccttactgcctacgccttcagaaaccccaacataggctac
tgccaggccatgaacattgtgacgtcggtgctgctgctgtatgctaaagaggaggaggcc
ttctggctgctggtggctctgtgtgagcggatgctgcctgactactacaacaccagggtc
gtaggagctctggtagaccaaggtgtttttgaggagctggccagggagtacgtccctgaa
ctgtacgattgcatgcaggacctgggagtcatctctaccatttccctctcctggttcctc
accctgttcctcagtgtcatgcccttcgagagtgccgtggtggtggtcgactgcttcttc
tacgagggcatcaaggtcatcttccagctggcactcagcgtgctgcacgccaacatccac
cagctgctgggggccaaggacgatggagaggccatgactgtgctgggaaggtacctggac
agcgtgaccaataaggacagcaccctgcctcccatcccccacctgcactccctactgaca
gacgatggggatccccacccggaggtggacatcttcaagctggtccgcagctcctacgag
aagtttggctccatcagggctgatgtgattgagcagatgcgcttcaaacagaggctaagg
gtcatccagaccatcgaggacaccaccaaacgcaacgtggtcagaaccattgtcacagag
actgccttcagcatcgacgaactggaggagctctacgttctgttcaaggaggaacacctg
accagctgctattggggtggaacgggtggcagcaaccccacggagcgccacgaccccagc
ctgccctacctggagcagtaccgcatcgacctggagcagttcagggggctgttctccctg
ctcttcccctgggcccctgtcaacgcggcccatgcagacctcctggccctgcgcttcttc
aggctcctggaccataacggagactctctgattaatttccgggagtttattagtggactg
agtgttttatgccatggggatctgactgagaaactgaagctcctgtacaagatgcatgtg
attcctgaggtgacccatgagcaggaggagccagactctgccttcgaggccacccagtac
ttctttgaggacatcaccccggaaacttccaatggccttgaccccaagtgcaagagcgag
aaggatgatggctttgtcagggtcacgttcaagactgagaaagtgaagaaactacacacc
cctgactaccgccattacatgaggctgtggaaccagggcaccaagaacaaactggacaac
atgaaggatctgcccaaactcaaccagagccagttcatagagctgtgcaagacactgtac
aacatgttcagcgaagacgcccaggagcaggagctgtaccacgccacggccaccgtcacc
agcctgctgctggagatgggcgaggtgggcaagctcttctgccattccaaggaccaggag
gagcaggaccaagatgatccagaggaggccaaaaccagtgggccagctcaagatggaggg
actaagcctgagggtgtcttccagcagaggggccagggagaggggaaggagaagagccag
gccaggccgtgtggccctgcgaaaagggacggcaggggcgagcagctgtctgccatggag
attaagctggaggactcatccccgaaggacatagggacatcgtcctccatgctcatctca
gatgacgagaccaaagacgacacgtccatgtcgtcctactcggtgctcagtggcggctcc
catgagctcgacgacaagcttcactgtgaggacattaatgacgacacggtcctggtgcgc
agcgagaacaggccccatgggggagggaacaggcctcacggtgaaggtgggccccatggc
agagatggggggctgcctcacagcaccagcatagataaagactgggccatcacatttgag
cagttcctggcatcggtgctcactgagcaggccctggtgctttacttcgagaagccagtg
gaggtggccgcacgtatcaccaatgccaagaatgtgaggaaagtggggtactccctactg
tccgctagcgactatgagatctccctgtctgggtaa
DBGET
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