Oncorhynchus gorbuscha (pink salmon): 124012996
Help
Entry
124012996 CDS
T07892
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124012996 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124012996 (cnga1a)
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124012996 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF2207_C
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
124012996
NCBI-ProteinID:
XP_046183056
LinkDB
All DBs
Position
LG24:complement(18214670..18225429)
Genome browser
AA seq
707 aa
AA seq
DB search
MISTSSTRPFLAVAPRISPNMASDTEEDSEDEIDETSPGPGRLFNVNNSNNNEEEEKKKK
KKEKKEKKEKKEKASKTCICFLRKKKEKMKQKEQEEKEKEEKEKEEKEKEEKEKKEKEEK
EKKEKEKKEGPKEVFFINPAGSLYYNWLFIITIPVMYNWTMIIARACFEELQHNHLVTWM
ILDYISDVLYLADMAFRTRTAYLEQGLLVKDKKLLLERYISSLQFKLDAISMLPTDVFYI
YLGINYPEIRLNKLLRITRMMEFFTRTETKTNYTNLFRISNLVMYIIIIIHWNACLYYSF
SKSIGFGSDPWVYPDLNDPEEPEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFFFH
VLDFLVGVLIFATLVGNISSMISNISAARVEFQARIDNIKQYMQKWKVDKELELRVITWF
DYLWTNDKAQDERETLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLQPQ
VFSPGDYICKKGDIGREMYIVKEGKLAVVADDGVKQFCVLGDGSYFGEISILAIKGSKAG
NRRTANIRSIGYSDLFCLSKDDLMESLTEYPEAKGMLEEKGRQILLKDGLLELDPSKIIP
ETTEIEEKVNRMYSNLELMQTKLKKLLGDYSTSQRATRQRIAEIERLTGEVVAEEDLDEE
EKEGGEEEKEGGEEEKKEGEAEEKKEEEKKEEEEEEEEEEEEEEEEK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcacatcaagcactcgtccgttcctggcggttgcgcctcgcatttctccaaac
atggcctcagacacagaggaggacagtgaggatgaaatagatgaaacctctcctggccca
gggcgtctgttcaatgtgaacaacagtaacaacaatgaggaggaggagaagaaaaagaag
aaaaaggagaagaaagaaaagaaagagaaaaaagaaaaagcttcaaaaacttgcatttgt
tttctcaggaaaaagaaagaaaagatgaagcagaaagagcaggaggagaaagaaaaggag
gagaaagaaaaggaggagaaagaaaaggaggagaaagagaaaaaggaaaaagaggaaaag
gagaagaaggagaaagagaaaaaggaggggcccaaagaagtgtttttcattaatccagct
ggcagtctgtactacaactggctgttcattatcacaataccagtcatgtacaattggacc
atgataatagccagggcctgctttgaggagctgcagcataatcacctagtcacctggatg
attctggattacatctcggatgtcctctacctggctgacatggccttcaggaccaggaca
gcctacctggagcaaggcctgctggtcaaagacaagaagctgctgttggagcgttatatc
agcagcctccagttcaagctggacgccatctccatgctgcccaccgatgtgttttacatc
tacctggggatcaactaccccgagatccgcctcaacaagctcctccgaatcacgcgtatg
atggagttcttcacccgcaccgagaccaagaccaactacaccaacctcttccgcatctcc
aacctggtcatgtacatcatcatcatcatccactggaacgcctgcctctactactccttc
tctaagtccatcggcttcggctctgacccctgggtctacccggacctgaatgacccagaa
gagccagagttcggggaactggggaggaagtactccttcagcctctactggtccacgctg
acgctgaccaccatcggcgagacgccatcaccggagctggactcagagttcttcttccat
gtgctggacttccttgtgggtgtgcttatcttcgccaccctggtgggcaacatcagctcc
atgatctccaacatcagcgccgcgcgggtcgagtttcaggcacgcatcgacaacatcaag
cagtacatgcagaagtggaaggtggacaaggaactggagctgcgagtcatcacgtggttc
gactacctgtggaccaacgacaaggctcaggacgaaagggagacgctgcggtacctgccc
gacaagctcagggccgaaatcgccattaacgtccacctggatactctcaagaaggtccgc
atcttcgctgactgcgaagcaggcctgcttattgagctggtgctcaagttgcagccgcag
gtcttcagccctggcgactacatctgtaagaagggtgacatcggccgtgagatgtatatt
gtcaaggagggcaagctggcggtggtggctgacgatggcgtcaagcagttctgcgtgctg
ggagatggcagctactttggggagattagtatcctagcgataaagggttctaaggcaggg
aaccggaggacggccaacatccgcagcattggctactcagatctcttctgcctgtccaag
gatgacctgatggagtcattgaccgagtacccggaagccaagggcatgctggaggagaaa
ggtcgtcagatcctgctgaaggacggcctgctggaactggacccttccaaaattatcccc
gaaaccacagaaatcgaggaaaaggtgaaccgcatgtacagcaacctggagttgatgcag
accaagctgaagaagctgctgggagactacagcaccagccagagggcaacgaggcaacgc
atcgctgagatagagaggctgactggagaggttgtagcagaggaggacctagatgaggag
gagaaggagggaggggaggaggagaaggagggaggggaggaggagaaaaaggaaggggag
gcagaggagaagaaggaggaggagaagaaagaggaggaggaggaggaggaggaggaggag
gaggaggaggaggaggagaagtag
DBGET
integrated database retrieval system
