Oncorhynchus gorbuscha (pink salmon): 124013047
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Entry
124013047 CDS
T07892
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124013047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124013047
03036 Chromosome and associated proteins [BR:
ogo03036
]
124013047
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
124013047
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
124013047
RSF complex
124013047
WICH complex
124013047
B-WICH complex
124013047
NORC complex
124013047
BRF complex
124013047
NuRF complex (fruit fly)
124013047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
124013047
NCBI-ProteinID:
XP_046183122
LinkDB
All DBs
Position
LG24:3696762..3706781
Genome browser
AA seq
1032 aa
AA seq
DB search
MSETGNGVELRKERAVELEETGGVEEKDDVSEASKEESSEAGQDAQDEDPSSSTAPAYEE
KVASDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDNR
HRRTEQEEDEELLSESSKTTNVCTRFDESPSFVKGGTMRDYQVRGLNWLISLYENGINGI
LADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIG
DREQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSE
IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVE
RLHTVLRPFLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMD
KMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRV
LIFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEEDSPKFIFMLSTRAG
GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAE
MKLQLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESDITDDDIDEILERGE
KKTMELKEKMNTMGESSLRNFTMESDNSVYTFEGEDYREKKKVVTNWIEPPKRERKANYA
VDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRN
PELPNSAQHQKEEQAKIDEAEGLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRD
DIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDT
KIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQF
RFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKGEGTP
DPRGGRRKKLKL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactggaaacggcgtggagctgcggaaagagcgagcagttgaacttgaagaa
accggaggagtggaggaaaaggatgatgtgtcagaggccagcaaggaggagtcttctgaa
gccggacaggatgcccaagatgaggacccctcttcatctacagcgccagcctatgaggag
aaagtggcatcagaccggaccaacagatttgagtacctactgaagcagacagaggtgttt
gcccatttcatccaacctgcggcccagaagacccccacctccccgctcaagatgaagcca
gggcgccctcgtgtcaagaaggacgagaaacagaatctcctctcggtcggagataaccgt
catcgtcgcacagagcaggaagaggatgaagagctgctgagcgaaagcagcaagaccacc
aacgtctgcacccgcttcgacgaatctccctcctttgtaaaagggggtacaatgagagac
taccaggtccgtggtctgaactggctcatctctctgtacgagaacggaatcaacgggatc
cttgctgatgaaatgggtttgggtaagacgctgcagacgatctctctgctggggtacatg
aagcactacaggagcatccccgggccccacatggtgctggtgcccaagtccaccctgtac
aactggatgaacgagttcaaacgttgggtcccctccctcaaagcagtctgcctcatcgga
gaccgagagcagaggaatgccctgatcagagatgtgctgctgccaggggagtgggatgtg
tgtgtcacctcttacgagatgctcatcatagagaaggccgtgttcaagaagtttaactgg
aggtacctggtcatcgacgaggcccacaggatcaagaacgagaagtcaaagctgtcagag
atagtgcgtgaattcaagaccaccaaccgtctgctgcttaccggcaccccgctgcagaac
aacctccacgagctctgggccctgctcaacttcctgctgccagacgtcttcaactcctca
gaggactttgactcatggtttgacaccaacaactgcctgggggatcagaagttggtggaa
cgtcttcacactgtactgcgtcctttcctgctgcgccgtatcaagaatgaggtggagaag
tctctgctgcctaagaaagagatcaagatgtacgtggggctgagtaagatgcagagagaa
tggtacaccaagatcctgatgaaggacatagacatcctgaactctgcagggaagatggac
aagatgcgcctgctcaacgtcttgatgcagctgaggaagtgctgcaaccacccgtacctg
tttgatggggccgagcccggcccgccttacaccaccgacctgcacctggccgtcaatagc
ggcaagatggccgtccttgacaagctgctgcccaagatgaaggctcagggctcccgtgtg
ctgatcttcagccagatgaccaggatgctggacatcttggaggattactgcatgtggcgc
aacttcggctactgtcgcctggacggacagacgccccacgaggagagacagatctccatc
aacgcgtacaatgaggaggacagccctaaattcatcttcatgttgagcaccagggccgga
gggctgggtattaacctggccacagctgacgtggtcatcctctacgactcagactggaac
cctcaggtcgacctacaggccatggaccgagctcacaggattggtcaaaagaagcaggtg
cgcgtgttccgtttcatcacggaaaacacagtagaggagaggatcgtggagcgagccgag
atgaagctccaactggactccattgtcatccagcaaggaaggctagtggatcccaacgcc
aacaagctggggaaggacgagatgctgtctatcatccggcacggcgccacgcacgtcttc
gcctccaaggagagcgacatcaccgacgatgacatcgacgagatcctggagcgaggcgag
aagaagaccatggagttgaaggagaagatgaacaccatgggcgagagctccctgaggaac
ttcaccatggagtccgacaacagtgtgtacaccttcgaaggagaggactacagagagaag
aagaaggtagtcaccaactggatcgagccacccaagagagagaggaaggccaactacgca
gtggatgcctacttcagagaggccctgcgtgtcagcgagcctaaagcacccaaggctcct
cgtccacctaagcagcccaatgtgcaggacttccagttcttccccccaaggctgtttgaa
ctgctggagaaagagatcctattctacaggaagactatcggctacaaggttcctcgtaac
ccagaactgcccaactctgctcagcaccagaaggaggagcaggccaagattgacgaggcc
gagggcctatcagaggaggagctggaggagaaggagaacctcctctcgcagggcttcacc
atctggaataagcgtgactttaaccagttcatcaaagccaatgagaagtgggggagagac
gacatcgagaacatcgccagagaggtggagggcaaaaccccagaggaagtcatggaatat
tccgctgtgttctgggagcgctgcaacgagctgcaggacattgagaagatcatggctcag
atcgagagaggagaggcccgcatccagaggaggatcagcatcaagaaagcactggacaca
aagattggtcgctacaaggcgccgttccaccagttgaggatctcgtacggcaccaacaag
gggaagaactacacggaggaggaggaccgcttcctcatttgcatgctgcacaagctgggc
ttcgaaaaggagtctgtctacgacgagctgcgccagtgcatccgcaactcgccccagttt
cgcttcgactggttcctcaagtccaggaccgccatggagctccagaggcgatgcaacacc
ctgatcaccctgattgaacgagagaacatggagctggaggagagggagaaggcagagaag
aagaagaaaggaccacggagtcagtcttctgctcagaagcgtaagggagaagggacccca
gacccgcgaggaggccgcaggaaaaagctaaagctgtga
DBGET
integrated database retrieval system
