Oncorhynchus gorbuscha (pink salmon): 124013093
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Entry
124013093 CDS
T07892
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124013093 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124013093 (psip1a)
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124013093 (psip1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
124013093
NCBI-ProteinID:
XP_046183206
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All DBs
Position
LG24:6940132..6957345
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AA seq
552 aa
AA seq
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MTTLTYKVANNFNIKLFHAGVRVSYVARRMARDYKPGDLIFAKMKGYPHWPARINDYSDG
AVKPANMKFPIFFFGTHETAFLGPKDIYPYLPNKEKYAKPNKRKGFNEGLWEVENNPKVE
LNGETQMMLSDNVTEKDSDSNPEGDEEGDYEKRKKPKVSGAESEAGQEEEDDEEDGGMQV
SEQGQPQGQDDPTPNESTDTPKPKRRRKKKSDVEADSEKEDTANSPTSSPLDGEGPTPKR
RGRKTKAEKMLLLQQQDPQGSGSDMDTAESDRKRKRTPEDKSKRGEEEKRLDGRRKKEDN
KGRELEGKKDPDAKRRRQTKEESSSDSENQEKSKGVAGDRKRQQPTLTETGDKDDRQRRK
PDEQKEQNKDDGNKVDERKGDKKKEISIESRLLRLHGEIKISLKIDNPDVKKCLVALDEL
GMLQVTTQHLQKHSELIATLKKIRRFKASQDIMDKSTMLYNKFKSMFLLGEGDQLLSQVL
NKSIAEQKQQEEARKGAQKKAERARENNTDNNMNGDSSPDDKKQESDKEKPAEEASTGDN
SSSVVKAQEETN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgttgacatacaaagtagccaacaatttcaatattaagttatttcacgcagga
gtcagagtgtcgtacgtcgcaagaagaatggctcgggattacaaaccgggtgacttgatc
tttgcgaagatgaagggctaccctcactggcctgccaggattaatgactactctgatgga
gctgtgaagccggccaacatgaagtttcccatctttttctttggtacccatgaaactgca
ttcctaggccccaaagatatatatccctacctgcccaataaggagaagtatgccaagcct
aacaagagaaagggcttcaacgaaggcctgtgggaggttgagaacaacccaaaggtggag
ctgaatggagagacgcaaatgatgctgtcggataacgtaacggagaaggactctgacagt
aacccggaaggggacgaggagggagattatgagaagaggaagaaacccaaagtgtcgggg
gctgagagtgaggctggacaggaggaggaggatgatgaggaggatgggggcatgcaggtc
tctgaacagggacagccccagggccaggatgaccccacaccaaatgaatctacagacact
cccaaacccaagagaagaaggaagaaaaagagtgatgtagaggctgactctgagaaagag
gacactgccaacagtcccacatccagccctctagatggagagggccccactcctaagagg
cgaggcaggaagaccaaagctgagaagatgctcctactccagcagcaggacccccagggc
tcaggcagtgacatggacactgctgagtcggacagaaagagaaagaggacgccggaagac
aagtccaagagaggagaggaggagaagaggctggacgggaggagaaagaaggaagacaac
aaagggagagagttggaggggaagaaggaccctgatgctaaacggaggagacagaccaaa
gaggagagctcctctgactcagagaaccaggagaagagcaagggggttgcgggagaccgc
aagcggcagcagcccactctgaccgagacgggggacaaagacgatcgtcaacgacgcaaa
ccagacgagcagaaagagcaaaacaaagatgatggaaacaaagtggatgaaaggaaagga
gacaagaagaaagagatatcgatagaatcgaggctgctgaggttgcatggagaaatcaaa
atctccctcaagattgacaacccagatgtgaagaagtgtctggtggcgttggatgagctg
ggcatgctgcaggtcaccacccagcacctgcagaaacactcagagctcattgcaacactc
aaaaagatccggaggttcaaggccagccaggacatcatggacaagtccaccatgctgtac
aacaagtttaagagcatgttcctgctgggggagggggaccagctgctcagccaggtgctc
aacaagtccatagcagagcagaagcagcaggaggaggccaggaagggagcccagaagaag
gctgagcgggccagggagaacaacacagataacaatatgaatggcgactccagtcctgat
gataagaagcaggagtcggacaaggagaagcctgctgaagaggcctcgacaggtgataac
agcagcagtgtagtgaaggcccaagaggaaaccaactga
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