Oncorhynchus gorbuscha (pink salmon): 124013202
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Entry
124013202 CDS
T07892
Name
(RefSeq) transforming growth factor beta activator LRRC32-like isoform X1
KO
K26316
transforming growth factor beta activator LRRC32
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124013202
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
124013202
NCBI-ProteinID:
XP_046183403
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Position
LG02:93101378..93110714
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AA seq
682 aa
AA seq
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MCQPGTSAKSTMAAYLWLVLAIVSDVAASLLRPPRQLSPCQMVQNDVYCNDLNLRTVPAK
LPHGIQKLDLSRNLLQNITQEVLAIYTTVHHLNLHSNKIQFIQPGLFKDMTNLQVLDLSS
NYLDVFAVSKTSIGPLTAVERLDLSGNGLYTGMTDFFLSEAPALMNLSLNGNSITKVGKE
TFCGALALRNIDLHNNVILEIEDGAFDSLLHLSELDLSINSITCITDFNLSKLKVLNLSK
NSMECFQTTDSDLEYELLYLDLRENNIHYFPVLPRRNKLMYLDLSRNHLMSVNTTGTADE
LEHFRNTFVPQKQSGGMSRHQDFSRLKYLNMSYNQIKSIPMSYFCSMVSLVHLNVSNNCI
GAFSIDQESPLNSLKTLDLSYNALQNLSFGENTLRSLQELFLQGNFLTIMDSGTFQRLPS
IRGLHLQQNYLKVCPSQQKSPQTDHNSQDPPGCVSFTSIPSLHLLYLSGNNLEVLPPYAF
NGTPLRLLDLSLNPGLDIHQNAFSSLETSLTNLSLRENHIPELNTDLSLLSSLKFVDLST
NKLTTLPLWNKASSIESLNLQNNNLVTLEYNTVLVLERTLKTLYMGSNPLSCCSNPRFLN
MLQHSDVVIPDFAIVTCQYTENSEPVEVNVGSVTQEQCQKLDSKSVSIIVIVVTALVLIA
VLVVLSKVCHPKRRKLNISFRA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcagcccgggaccagcgctaaaagcaccatggcagcatacctctggctggtcctg
gccatcgtcagtgatgttgcagcatccttgttacgtcccccacgccaactctccccctgt
caaatggtccagaatgacgtgtactgcaacgatctgaacctgaggaccgttccagccaag
cttcctcatggcattcaaaagctcgacctgtctcgtaaccttctacaaaacattactcaa
gaagttctagcaatctacaccaccgttcatcatctgaacctccactccaacaagatccag
ttcatccagccaggtctgttcaaagacatgaccaatctgcaagtgctggacctctccagt
aattacttggatgtttttgctgtttcgaaaaccagcattgggcctcttacggctgtggag
aggcttgacctctcaggcaatggcctgtacacggggatgaccgacttttttctcagtgaa
gccccagcactaatgaacctttctctgaatggcaacagtatcaccaaagtgggcaaggag
accttttgcggagctttggccttaagaaacattgatcttcacaacaacgtcatcttagag
attgaggacggagcatttgactcgttgctccatctgtccgagcttgatttgtccattaac
tccatcacttgcatcactgactttaacctttccaaactcaaggtgctgaacctcagtaag
aacagcatggagtgcttccaaaccacagattcagacctagagtatgagctcctctacctc
gacctgagggaaaacaatatccactacttccccgttctccccagaaggaacaagctcatg
tacctggatttgtccaggaaccacctgatgagtgtcaataccacaggaactgccgatgag
ctcgagcacttcagaaacacgttcgtacctcaaaagcagtcaggtggaatgagcagacac
caggacttctcaaggctcaagtacctcaacatgagctacaaccagataaagagcataccg
atgtcttacttctgcagcatggtgtcccttgtgcatcttaacgtaagtaataactgtatc
ggggccttttccatagaccaggagagccctctgaactctctgaagaccctggacctgagt
tacaatgccctacaaaacctctcatttggggagaacacgctacggtcactgcaggaactc
ttcttacaagggaacttcctcaccataatggactctggaacgttccaaagactgcctagc
atcagaggccttcacctccagcagaactacctgaaagtctgcccttcacagcaaaaatca
ccccagacagaccacaactcccaggatcctccaggctgtgtctcctttacatcaatacca
agcctgcacttgttgtacctttctggaaacaatcttgaggttctgccaccatatgccttc
aatggcaccccactcaggttactggacctgtccctaaacccaggcttggacattcaccag
aatgctttctctagtttggagacctccctaactaatctctcactgagagaaaaccacatc
ccagaattgaacacggacctttccctgctaagtagtctcaaatttgtggacctgtccacc
aacaagctgaccactctccccctttggaacaaggcgtcctccatcgagtccctgaacctg
cagaacaacaacctggtgaccctggagtacaacacagtcctggtcctggagcggacgctc
aaaaccctctatatgggctcgaaccctctcagttgctgcagcaacccccgcttcctcaac
atgctccagcactctgatgtggtcatcccggacttcgcaatagtaacctgccagtacaca
gagaactcggagccagtggaggtgaatgttgggagtgtgacgcaagagcagtgtcagaag
ctagacagtaagagcgtgagcattattgtcatcgtggttacagctttggtgctgatagcg
gtgctggtggtgctctccaaggtgtgccaccccaaaaggcgcaagctcaacatcagcttc
agggcctaa
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