Oncorhynchus gorbuscha (pink salmon): 124013227
Help
Entry
124013227 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: teashirt homolog 1-like
KO
K09236
teashirt
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124013227
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124013227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
zf-met
Zap1_zf1
zf-C2H2_6
Zf-C2H2_ZNF451
Homeobox_KN
DUF760
DUF7410
zf-C2H2_ZNF142_18
Motif
Other DBs
NCBI-GeneID:
124013227
NCBI-ProteinID:
XP_046183435
LinkDB
All DBs
Position
LG24:complement(33271165..33299806)
Genome browser
AA seq
1149 aa
AA seq
DB search
MPRRKQQAPRRSVAYGDEDEFKADDKIDEEHLQDDGLSLDGQEGEYLCNEDDDAGDQFSF
QNSPFSNGTNPDAGYASPLSDTSDQLIDFQSTRSKDGLDKEEAVRERVDHLKIPNGLSLQ
DSLAQMKAVYANLISDASWSSITKDMLRSNSNSNKVISVISNSNGSSHKGSNGIANSNTI
RLVNNNNHTNSSSNTSAPTNTTSNTTATSTANTNNNGTGVSTGSTGGVTYDWHQAALAKT
LQHTPYNLLPEPSLFSTVQLYRQNNKLYGPVFTGASKFRCKDCSGAYDTLVGLTVHMNES
GHYRDDNKDKEEERGKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK
TKHYQKVPLKEPMPALTSKLVPPTRKRAFQDLVSPCSPESVHNTPGVHLGETTKDQKVVN
PYVTANNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTNT
ASKKGKQLVFDPLVEEKMQSIPLPPTSTRLPAPNVKSQPDSLLLHSSHTEEKGEEHEEKM
EMSEPENKIKEEKQDLTEKSEKTGKAGHYKYLTEEDLEETPKGGLDILKSLEFTVSSAII
KAQTGTPTWGGAGYPSIHAAYQLHGSLKSSMQSVQVVQPLFSTSSLKVMSSDSSNLIHSP
ISHSPPPSHKNNVLAMEELVEKVTGKVSVKKEKDEKASENKCKVSSTKXHSPLSKERKGS
PMPDSLNKPVKNIDVEDKSEPRSREGEAKDGKADPPMKNGADMPKTVASNGCNGLGIITD
HSPEQSFVNPLSALQSIMNNHLGKASKTATPFLDPLAMLYKISNNMMEKPMNNSNQVKQV
ESINRFYDNDDQPMDLTKSKNTNGRNANSTSTTPNNNSNCNTNNSNRPILSSLSESLSSP
LRENALMDISDMVKNLTGRLTPKSSTPSSISEKSDADNSAFEDGLEELSAFQKRKGRQSN
WNPQHLLILQAQFTSCLRETADGKFVMTDLGPQERVHICKFTGLSMTTISHWLANVKYQL
RRTGGTKFLKNIDSGQPLFLCSDCASQFRTPSSYINHLESHLGFSMKDISKLSIDHLREQ
QAVTRMITEKTFSSLGLNEEDSCSVFQCKLCNRTFVSKHAVKLHLSKTHGKSPEDHLIFV
TELEKFDKA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagaaagcagcaagcgccaaggcggtccgtagcttatggggacgaggacgaa
tttaaggctgatgacaagattgatgaggaacacctgcaagatgatgggctctccttggat
ggacaggaaggcgagtacctctgcaacgaggatgacgatgccggggaccaattcagcttc
cagaactcccctttcagcaatggcaccaaccctgacgctggctacgcttctcctctcagc
gataccagcgaccaacttatcgacttccagagcacacgctccaaggacggactggataag
gaggaggcagtcagagaaagagtagaccacctaaagatccccaatggcctgtctctgcag
gacagcctggcgcagatgaaagctgtctatgcaaacctgatctcggacgcctcttggtcc
agcatcaccaaggacatgctaagaagtaacagcaacagcaacaaggtcatcagtgtgatc
agcaacagcaatggaagcagccacaaggggagcaacggtatcgccaacagtaatactatc
agacttgtgaacaataataaccacaccaacagcagcagtaacacttctgcccctaccaac
actaccagcaacactaccgctacaagcaccgcgaacactaacaacaatggcactggtgtc
agcactggcagcaccggtggagtgacctacgactggcaccaagcggctttggccaaaacc
ctgcagcatacaccatataacctcctccccgagccaagcctcttcagcactgtgcagctg
taccggcagaataacaagctctacggtccggtgttcaccggtgccagcaagttccggtgc
aaggactgcagcggagcctatgacacgctggtggggctcacggtacacatgaatgagtca
ggccactaccgtgatgacaacaaggacaaggaagaggagcggggaaaaaggtggtccaag
ccacgtaagcgctccctcatggagatggaaggcaaggaggacgctcaaaaggttctcaag
tgcatgtactgcggccattcctttgaatccctacaggacctgagtgtccacatgatcaaa
acaaaacactaccagaaagtgcctctcaaagaacccatgccagccctcacctcaaagctg
gtgccacctaccagaaaaagagcatttcaggacttggtgtccccgtgctcaccagagtct
gtccacaacacacctggtgtacacctgggggagactacgaaagaccagaaagtggttaac
ccctatgtcacggcgaataaccgctacggctaccaaaatggcgccagttacacctggcag
tttgaggctcgcaaggcccagatcctcaaatgcatggagtgcgggagttcccacgacacc
ctgcaacaactgacagcccacatgatggtcacaggacactttttgaaagtgaccaacaca
gcgtccaaaaaggggaagcagctggtgtttgaccccctggttgaggaaaagatgcagtcc
attcctctcccgccgacctctacacgactccctgcgcccaatgtgaagtcacagcccgat
tctcttctcctgcactcctcgcacactgaagagaaaggggaggaacatgaggagaaaatg
gagatgagtgaaccagagaataagatcaaagaagagaaacaggatctgactgagaaaagt
gagaaaactggcaaggctggacattacaagtatctcacagaggaagacctggaagagact
cccaaaggaggtctggatatcctgaagtccttagagttcacagtgtcaagtgcaatcatc
aaggcccagacagggacgcccacctggggtggtgctggctaccctagcatccacgctgcc
taccagctccatgggtctctgaagtcctccatgcagagtgtccaggtggttcaacccttg
ttcagcactagcagcttgaaggtgatgtcttctgactccagcaatctgatccattcaccg
atcagccattccccacctccaagccacaagaacaatgtgctggccatggaggagctggtg
gaaaaagtcacagggaaggtctctgtgaagaaggagaaggacgagaaggcgtcagaaaac
aaatgcaaagtgagctctaccaagnntcactccccactgtccaaggagaggaaggggtca
cccatgccggatagcctcaacaagccggtgaaaaacattgatgtagaggataagagtgag
cctagaagcagagagggagaggcaaaagacggcaaagcggatccgccaatgaagaacgga
gcagatatgccaaaaacggtagccagcaatggctgtaacggcttgggaatcatcacggat
cattcacctgagcagtcatttgtcaaccccctcagtgcgttgcagtcaatcatgaacaat
cacttgggaaaggcctcgaagacagccacgccctttctagaccctctggcaatgctgtac
aagatcagtaacaacatgatggagaagcccatgaacaactccaatcaggtcaagcaagtt
gagtcaatcaatcgattctatgacaatgatgaccaacccatggacttgacaaaatccaaa
aatacgaatggacgcaatgctaacagcacctccactacgccgaacaacaatagcaactgt
aacaccaataacagcaacaggcctattctgtcaagcttgtctgaatctctctcgtcccct
ttacgggaaaatgctttgatggacatctccgacatggtcaagaacctgaccggccgtctg
acaccgaaatcctctaccccatcctccatctctgagaaatctgacgcggacaacagcgcc
ttcgaggatggcttggaggagctctctgcattccagaaaaggaaaggccggcagtccaac
tggaatcctcagcacctcctcatccttcaggcccagttcacctcctgtctccgggagacg
gctgacggcaagttcgtcatgactgacttaggcccccaggagcgggtccatatctgcaag
ttcactggtctctccatgaccacgatctcccattggctggccaatgtcaagtaccagctg
aggcggacaggcgggacaaaattcctgaaaaacattgactcgggccagcccctgtttctc
tgcagtgactgtgcctctcagtttaggactccttcctcttacataaatcatttggagtcc
cacttaggcttcagcatgaaggacatctcaaagctttccatagatcaccttagagagcag
caggcagttaccagaatgataacggagaaaacgttcagttccctgggacttaatgaggaa
gactcatgctctgtatttcagtgcaagctgtgcaatcggacctttgtcagcaagcatgca
gtcaaactgcaccttagcaaaacgcatggcaaatctccggaggaccatctcatctttgtc
actgaactagaaaagtttgataaagcataa
DBGET
integrated database retrieval system
