Oncorhynchus gorbuscha (pink salmon): 124013297
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Entry
124013297 CDS
T07892
Symbol
tcirg1a
Name
(RefSeq) LOW QUALITY PROTEIN: V-type proton ATPase 116 kDa subunit a3
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00190
Oxidative phosphorylation
ogo01100
Metabolic pathways
ogo04142
Lysosome
ogo04145
Phagosome
Module
ogo_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
124013297 (tcirg1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124013297 (tcirg1a)
04142 Lysosome
124013297 (tcirg1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124013297 (tcirg1a)
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124013297 (tcirg1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
Takusan
Motif
Other DBs
NCBI-GeneID:
124013297
NCBI-ProteinID:
XP_046183522
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Position
LG24:12374976..12386994
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AA seq
575 aa
AA seq
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MGAFVRSEEVCLVPLFLQSGSAYNCASELGELGLVEFRDLNPNVNSFQRKFVNEVRRCEE
MEKSFTYLEQEIGRSLFPPLAGPLPTPSPVPSAPQPRELMAIEEESERLARELREVSRNR
DSLMNQLIQLSQYRGFLIQTQSLTAPPPSSPETAALLDNRQGIRLSFVSGVVHPWKVPSF
ERLLWRACRGYIIVDFREMDERLESPETGEMVQWTVSLIFFWGEQIGQKVKKICDCFHTH
TFDYPEGTTEREKILHGLQGRIIDIKTVLSQTEHYLQQLLCRSVALLPQWKVRFQKCKAV
QAVLNLCSPSVTDKCLMAEAWCPVSKLLLLQSALIEGTRKNDSGVDSFYNRLPDPSTPPP
TLFPXNSFTAGFQSIVDAYRVARYREVNPAVYTIITFPFLSAVMFGDVGHGLLMTMAALW
MVLQERDLKLRTNDNEICQMMFGGRYLILLMGLFSIYTRAVYNECFSRGLSPFPSGWLLQ
PMFQHYNWSLKLSEVLWVMVMRISLSWQGYMGSVVLAVIYSFFATLTVSVLLVMEGLSAF
LHALRLHWVEFQNKLYSGTGYKLNTFSCSSNLNPL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgttcgttcggagcgaggaggtgtgtcttgtgccgctctttctccaatcgggg
tcagcctacaactgcgccagcgagcttggagagctgggtctggtcgaattcagagacttg
aaccccaatgtcaactcgttccagaggaagtttgtgaacgaggtgcggcgctgtgaggag
atggagaagtccttcacgtacctggagcaggagattggccggtccctgttccccccgctg
gcgggtcctctccccacccccagccctgtgccctccgctccccagcccagagaactcatg
gccatcgaggaggagagcgagaggctggccagggagctacgagaggtgtccaggaacaga
gacagcctgatgaaccagctgatccagctcagccaatacagagggtttttgatccagaca
cagtccctcacagctccgcctccctcttctccggagactgctgccttactggacaacaga
caaggcatcaggctgagttttgtgtctggcgtggtccacccgtggaaggttccgtcgttt
gagcggctgctatggcgagcgtgccgcggttacatcatcgtcgacttcagggagatggac
gagaggctggagagtcctgaaacgggcgagatggtccagtggactgtctccctcatcttt
ttctggggcgagcagattggacagaaagtcaagaagatctgtgattgtttccacacccac
acctttgactacccagagggcacaacggagagagagaagattctgcacgggctgcaggga
aggatcatagacatcaaaacggtcctctcccagacggaacattacctgcagcagctgctg
tgtcgctcggtggccctgctgccccagtggaaggtgcggttccagaagtgtaaggccgtc
caggccgtgctcaacctctgcagcccctccgtcactgacaagtgtctgatggccgaggcc
tggtgtcccgtcagcaagctgctactgctgcagagcgccctgatagagggaacgaggaag
aacgatagtggtgtggactcattctataaccgcctcccggacccaagcacccctcctccc
accctcttccccnacaactccttcacagccggcttccagagcatcgtagacgcataccgt
gttgccagatacagagaggtcaacccagcggtgtacaccattatcaccttccccttcctg
tctgcggtgatgtttggggacgtgggccacggcctcctcatgaccatggccgctctctgg
atggtgctgcaggagagagacctcaaactcaggaccaatgacaacgagatctgccagatg
atgtttggtggtcggtatctgattctgctgatgggtcttttctctatctacaccagagct
gtgtacaacgagtgtttcagtagaggcctcagccccttcccctcgggatggctcctgcaa
cctatgttccaacactacaactggagtctaaagctgtcggaggtgctatgggtgatggtg
atgcgtatcagcctgtcgtggcagggctacatgggatctgtagttctagccgtcatctat
tccttctttgccacactcaccgtctccgtcctgctcgtcatggaggggctgtccgccttc
ctgcacgcactcagattgcactgggtggagttccagaataagttatacagtggaacggga
tacaagctcaacactttctcctgctcctccaacctgaaccctctatag
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