Oncorhynchus gorbuscha (pink salmon): 124013368
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Entry
124013368 CDS
T07892
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124013368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124013368
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124013368
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Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
124013368
NCBI-ProteinID:
XP_046183628
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Position
LG24:31872787..31903152
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AA seq
569 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQSR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLIMDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKELKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVTSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQTERVQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcgggcca
ggaatgaaagttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatccgagatcctacagaaggaggtctacttgtttgaaagaatcgactcacagagtcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgaccaaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggctgaggcggatgaacaggaggtggttgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacatcttttctccctcaac
ctcagtggtgtcgcaaggggtcggagctgggagccaactctcctaccacgtaccacccag
ggtctgacctcagtgctgttggccctgaagaaatgtcccatgatccgctaccagctgtct
tcagacatggccaagagactgggagagagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcatggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtacacgagctgctt
ggcctcaacaacaaccgtattgacctgtcccgagtcccagggatcagcaaggagctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaataatctgtacctgaacttt
ggagagatcggcacaaacatcaagaacctgatggaggacttccagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtggacaactacccccag
ttcaaaaagatgtctggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagaggtggagcaggagcttgcctgccag
aatgaccactcaagcgcgtcacagaatgtgcgtaggctgctgcagaacccgcgggtaagc
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcatc
aacccccaagatgcagttgccattaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgatcaagggg
cggctgaaagacagtcagttcccttacctaggacccagctcccttcgagacaggccacag
gatatcatagtgttcgtcatcggaggggccacctatgaggaggcgctggcagtctacaac
ctgaaccgcaccatgccaggggttcggatcgtactgggcggcaccaccatccacaatacc
aagagcttcctggaggaagtgacattgacggcgggtgcgggccagaccgagagggtgcag
agggcaggtggtcatcccaacagacgctga
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