Oncorhynchus gorbuscha (pink salmon): 124013406
Help
Entry
124013406 CDS
T07892
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124013406
03036 Chromosome and associated proteins [BR:
ogo03036
]
124013406
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
124013406
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Topoisomerases
124013406
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
124013406
Centrosome formation proteins
Centriole proteins
124013406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
124013406
NCBI-ProteinID:
XP_046183701
LinkDB
All DBs
Position
LG24:complement(39898463..39929004)
Genome browser
AA seq
1670 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKKNAAKKREEEAAAAAAAANGRGDGGKAEGGGGGGGAKKKGG
DKMSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDLGMNLREITYVPGLYKIF
DEILVNAADNKQRDKSMSTIKISIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHL
LTSSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMGKTSDSK
IKFFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTKRAYDIAGSCKGVKVMLNGKKLPVT
GFRSYVDLYVKDKVDEVGVALKVVNESVNERWEVCLTMSEKGFQQISFVNSIATTKGGRH
IDYVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQT
KSFGSKCPLSEKFIRAATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDAN
DAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENA
EINNIIKIVGLQYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLL
KHTFLEEFITPIVKVNKNKQEHAFYSIPEFDEWKKQTVNFKTWHIKYYKGLGTSTSKEAK
EYFADMEKHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYL
YGTQAKHLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCMKRNDKREVKVA
QLAGSVAEMSAYHHGEQSLLMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRY
IFTMLSPLAKMLFPAVDSSLLKFLFDDNQKVEPEWYIPILPLVLVNGAEGIGTGWACKIP
NYDHREIVNNLYRMLNMQDPLPMLPSYKNFKGVIHELGQNQYMVSGEISVLDKNTIEITE
LPVRTWTQAYKESVLEPMLQGTEKTPALINDYKEYHTDQTVKFVVRMSEEKLAQAEAAGL
HKVFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFFELRLHYYKLRKDWLVGSLGAEA
SKLSNQARFVLEKIEGKITIENKSKRELIRMLVQKGFESDPVAAWTKAQEKALEEDDHDG
NNSDSSVDSGSSSGPNFNYILNMPLWCLSKEKVDELLRQRDIKKGELNELQRKSPEDLWK
EDLAVFVEELDKIEAQEQADICAGRGTKLVKGKVGKPKVKKLHLEETLPSLYGRRVVPTI
TQAMKTDASKKMTKKKKGDADLVMKLEFDDEMGVLGSDGGTGENSLNSSSNTPAPTPAKP
KAPRVKREKKEPGTPRARKTPTPKGSSGKKVKKRNPWSEDESKSESDLEDSEPVVIPRDT
KSQRASAVKPKYTFDFSEEEDGGEEEEDDEDAASSPVRPCKDDFTASSETKDRYNDHSAN
DEDDEDIFPPPKQATTTVSPAKKKEPESIFSSSKSAFSSEKSNDSDDLKLDSDEEDKAFS
YSSSSAFDKPVPAKKGQEAARSQQDAQYSAKKLSDAALKPRKAPAPKTPPKQKLDTSVWD
SDSDTGSKKPSPTLKGKSGGRKRKQSGSEEDDFSPKKTPGKGPKTPASRKPSKKVAVTPP
PMSDDDDVDSNRFSQSSVASRERPGRGRAKKEVKYFAESGSDDDQYDMFE
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcggaggtctgacttgggtgaccctctttgataagaag
aatgctgccaaaaagagggaggaggaggcagccgcggcggcggcagctgcgaatggcagg
ggtgatgggggcaaggcggagggaggaggaggaggaggaggagccaagaagaagggagga
gataagatgtcagtggagagggtgtaccagaagaagacccagctggagcacatcctactg
aggccagacacctacatcggctctgtggaacctgtcacccagcaaatgtgggttttcgat
gaagaccttgggatgaatctacgagaaatcacttatgtccctggattatacaaaatcttt
gatgaaattcttgtcaacgcagctgacaacaaacagcgagataagagcatgtcaaccata
aagatctccattgatcctgagtccaacaccatcaccatctggaacaatggtaaaggcatc
cccgtggtggaacacaaagatgagaagatgtacgttcccgctctcatcttcggacacctc
ctcacctccagtaactacgacgacgagcagaagaaagtcacaggtggaaggaacgggtac
ggtgctaaactctgcaacatcttcagcacaaagttcacagtggaaaccgcctgcaaggag
tacaaacacagcttcaaacagacttggcagaacaacatggggaagacgagcgactccaag
atcaagttctttgacggggacgacttcacgtgtgtgaccttccagccggacctgtccaag
tttaagatggagaagctggacaaggacatcgtggctctgctcaccaagagggcttacgac
atcgctgggtcctgcaagggcgtcaaagtcatgctcaacgggaagaaactccctgtgaca
gggttccgcagctatgtggacctttacgtgaaggacaaggtagacgaggtgggcgtggcc
ttgaaggtggtcaacgagtcagtcaacgagcgctgggaggtctgtctcaccatgagtgag
aagggattccaacagatcagcttcgtcaacagtatcgccaccaccaagggtggcagacac
attgattacgtggtggaccagatcgtagccaagctgatagaggtggtgaagaagaagaac
aaagctggtgtctcagtcaaacccttccaggtgaagaaccacatctgggtgtttgtgaat
gcgttgatcgagaacccgacctttgactcccagaccaaggagaacatgaccctccagacc
aagagctttggttctaagtgtcctctgtcagagaagttcatcagagcagcgaccaactgt
ggcatcgtggagagtatcctgaactgggtgaagttcaaggcccagacacaactcaacaag
aagtgttcttcagtgaagtacagcaagattaaaggcatccccaagcttgacgacgccaac
gatgctggtggtaaacactcgtcagaatgcactctgatcctgactgagggagactcggcc
aagtccttggccgtctcaggccttggtgtcattgggcgagatcgctatggtgtgttccca
ctacgaggaaaaattctgaacgtacgagaggccacacacaaacagatcatggagaatgca
gagatcaacaacatcatcaagatcgtgggtctgcagtacaagaagagctacgaggaccca
gagtctctgagatccctacgctacggcaagatcatgatcatgaccgatcaggatcaggat
ggctcccatatcaagggtttgctcatcaatttcttccatcacaactggccatccctgctc
aaacacaccttcctggaggagttcatcacgcccatcgtcaaagtgaacaagaataaacag
gagcacgctttctacagcatcccagagtttgacgaatggaagaaacagacggtcaacttt
aaaacctggcatataaagtactacaaaggtttgggtaccagcacaagcaaggaggccaag
gagtactttgcagacatggagaaacaccggatcatgtttagatacgccgggacagaggac
gacgctgccatcacactggcgttcagtaagaagaagactgacgacaggaaggagtggctc
accaacttcatggaggacaggagacagaggaggatgcacggcctgccagagcaatacctg
tacggcacgcaggcgaaacacctgtcctacaacgacttcatcaacaaagaactcatcctc
ttctccaactctgacaacgagagatccatcccatccttagtggacggtctgaagccaggt
cagagaaaggtactcttcacctgtatgaagaggaatgataagagggaggtgaaggtggct
cagctggctggttcagtggcagagatgtctgcctaccatcatggagagcaatccctgttg
atgacaattgtgaacttggcccagaactttgtgggcagcaacaacgtgaacatcctgcag
ccgctgggtcagtttggtacccgcatcaacgggggcaaggatgctgccagcccccgttac
atcttcaccatgctcagtcccctggccaagatgttgttcccagcggtggactccagtctg
ctgaagttcctgttcgatgacaaccagaaggtggagccagagtggtacatccccatcctc
cctttggtgctggtgaacggggccgagggcatcgggacgggctgggcctgcaagatcccc
aactacgaccacagagagatagtcaacaacctgtaccgcatgctcaacatgcaggaccct
ctgcccatgctgcccagctataagaactttaaaggagtgatccatgagttgggtcagaac
cagtacatggtcagtggtgagatctctgtcctggacaagaacaccattgagatcactgag
ctgcccgttcgcacctggacacaggcctacaaggagtcggtactagagcccatgctccag
gggacagagaagactcccgctctgattaatgactataaggagtaccacacggaccaaacc
gtcaagtttgtagtccgtatgtcagaggagaagctggcccaggcagaggctgctggacta
cacaaagtcttcaagctacagtccagcctcacctgcaactccatggtgttgtttgaccac
atgggctgtctgaagaggtatgactcggtccaggacattctcaaggagttctttgagctg
cggttgcactactacaagctgaggaaggattggcttgtggggagcctgggggcggaggct
tccaaactgtccaatcaggcacgatttgtgctggagaagatcgaaggaaagatcacaatc
gagaacaagtctaagagggaactgatcaggatgctggtgcagaaaggctttgagtcggac
ccggtggcagcatggaccaaggcacaggaaaaggctctggaggaggacgatcatgatggt
aacaacagtgacagctctgtggactctgggtcgtcgtcgggaccaaacttcaactacatc
ctcaacatgcctctgtggtgcctgtccaaggagaaggtggacgagctgctccgacagaga
gacatcaagaaaggagagttgaatgagctgcagaggaagtctcctgaggacctgtggaag
gaggacctggctgtcttcgttgaggaactggataaaatcgaggcccaggagcaggcagac
atatgtgcaggtagaggcaccaagctggtgaagggcaaggtgggcaagcccaaggtgaag
aaactacacctggaggaaacgttaccctctctgtacggccgcagggtcgtacccaccatc
acacaggccatgaagactgacgcctccaagaagatgaccaagaagaaaaagggtgatgcg
gacctggtgatgaagctggagtttgatgatgagatgggagtactgggatcagatggagga
acaggggagaactccctcaactcctcctctaatacaccagccccaaccccagccaagccc
aaggccccccgggtcaaacgggagaagaaggagccaggtactccaagagccaggaaaacc
cccacacccaaaggatcatctggtaagaaggtgaagaagcgtaacccctggtcggaggac
gagtccaaatcagagagcgatctggaggacagtgaacctgtagtcattccccgagacacc
aagtcacaacgggcctcagcggtcaagcccaagtacacctttgatttcagtgaggaagag
gatggaggggaggaagaggaggatgatgaagatgctgcgtcctcgcctgtccggccctgc
aaagacgacttcactgcctcctccgagactaaagaccgatacaacgaccacagcgccaat
gacgaggatgatgaagatatcttccccccgcccaaacaggcaaccaccaccgtctcacca
gcaaagaagaaggaaccagagagtatattctcttcctccaaatcagccttctcctctgaa
aagagcaatgacagtgacgatctgaagttggacagtgatgaggaagacaaagccttctca
tactccagcagctctgccttcgacaaacctgtcccagctaagaaaggacaagaagcagcc
cggtctcaacaagacgcacaatactcagctaagaagctgtcggatgcagctctcaaaccc
aggaaagcaccagcgcccaaaacgccaccaaaacagaagcttgacacgtctgtctgggac
tctgactccgataccggctccaagaagccttcaccaacgctcaaaggtaaaagtggtggg
aggaagaggaagcagtctggatctgaagaggatgatttcagtcccaagaagacacctggg
aaaggacccaaaacccctgccagcaggaagccatcaaagaaagtagccgtgaccccgccc
cccatgtcagatgatgatgatgtggactccaaccgtttcagccaatccagcgtggcgtcc
cgagaacgaccgggcagaggcagggccaagaaggaagtgaagtactttgctgagtcaggg
tcagatgatgatcagtacgacatgtttgagtag
DBGET
integrated database retrieval system
