Oncorhynchus gorbuscha (pink salmon): 124013518
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Entry
124013518 CDS
T07892
Symbol
stab2
Name
(RefSeq) stabilin-2 isoform X1
KO
K19013
stabilin-2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124013518 (stab2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ogo00536
]
124013518 (stab2)
Glycosaminoglycan binding proteins [BR:
ogo00536
]
Hyaluronan
Cell surface receptors
124013518 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_TEN
EGF_MSP1_1
FXa_inhibition
EGF
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
124013518
NCBI-ProteinID:
XP_046183751
LinkDB
All DBs
Position
LG25:11259320..11293038
Genome browser
AA seq
2546 aa
AA seq
DB search
MAPVTGPLALMLLLLGLDRYTSSAAAAKNRCDKTTLVMTKTECHSCSISSNVGCPAGFNK
KIPGKGNPDCKYRVSPMASLVLNIKGCSHECYKEVVEPHCCPGYWGPDCIECPEDADRPC
SNNGLCSEGMGGNGSCSCKPGFVGTACEDCADNLYGSTCSSACTCGHGLCNAGIHGDGIC
TCFSGYKGPKCDLELPECSSLLCPQNTRCMQGSLDGSLRCQCLPGYRTSGDQCISINPCL
QQVCHIHATCAHVGPNKHLCTCAQGYSGDGHVCVPIDPCQTHLGGCSADSARCVYDGPGK
SHCECQDGFDHLTGGVSCSLKDLCRPNSCSKHANCSTVEPNIVECTCHEGYVGNGKICYG
NIMQRLNDLNSEPGGQWTGQLSNAITLFGAITWPLSNFGPFTIFVPINKGFKGTPLIPLM
ADPMKAKYLCKLHISPVEMPYDMLNRGVIYYTLTGKAGETVTTDDDKQLKIRIHGSRKKG
GVLQSDVIASNGIIHIINKLMDSVSPTVESDKEENLMKILSDYGKFSKFKELLMKANVDS
VLEEAGPSTIFAPTNTAFDAMKAGQLDYLTSSEGSTKLLELLRNHVIPSFNLEFYNAVSN
QRMRTIANQILSFNVTENGQILVNGMAVLEADVEAKNGRLYSMDGVLIPPSIEPVLPHRC
DITENKLLKGDCVSCSKVTKSGCPSGVSTNTFLRGCVFRNILSFNILTFGCAPICNRTLT
TPLCCKGFYGPDCTPCPGGFNTPCSRHGQCSEGIEGNGTCVCETNFKGSRCHYCSNPNKY
GPACDKTCDCIHGVCDNRPEADGRCKVDSCQQGYTGQYCERHTQACGPQVTFCHARAECN
FNGGAVRCVCNPGFQGDGITCVYTEPCALPHRGGCDVNAKCIKTGPVSHTCQCLAGWRMD
EDGCQPINDCLGPDRGGCHPNATCIYVGPGQSGCACKSGFRGNGRECEASNPCVAQNGGC
HYLASCLYVSGAWKCVCEDGYTGDGEACYGNVGQELMALPDVTEFAKWVTDIGISQLPLM
NSQNITLLVPSTAATDKMTKEDKDFWTTQGNLPSIIKNHMIQGVYSLDDLRDASSNLQLT
SVLKKALPVTMTNESTVIGGATITTANVASTNGLIHIVDTVLVPERSLSEGLLELLARRP
EFSLFRSYLVHHNLTAEIEQASAYTVFAPIDGAVLEYLKNTASDTMDLNTTRYHIVLSDR
LMKVDLLGGAYKETMLGFSYQLGILPRDDKLFVNEARVNVSDILGGKGVIHGLSAVLDIT
KNRCDIQQFNTFPGLCQDCFYPQLNSCPTGATTIALVRKKCMFSRVYQGERLLSIGCRTI
CKNTTIVRRCCGGFYGEHCEPCPGPKGQPCYGNGMCQDRTNGTGVCQCNKNFNGTACETC
QEGKYGIHCDQDCRCKNGRCNDGIHGDGTCECDAYWRGVACDDKFTREENCGDRKCHTSA
ICVVGRCECLAGFQGNGTDCKAKDACKDNNGGCSPHAVCKRTLPGRRQCVCNTGYHGDGM
VCVQINPCLDGKGGCHVNADCIHTGPNKTSCVCSQGYTGDGKESCTVINLCRTKQRDCHR
YARCNMTGPGERSCTCMDGYMGDGISCKGTVGKELLTRKLRDFYLGLMMADISLKGRGPF
TVFAPTAEAFGQGETAKELRHPSKREKRAKILRYHIVSCHTLLASDLTTPRNLTTLMGDV
LTITYSEGTILINNLVKVVHSDDPSINGIIHEIDTFMIPESLKKADVIEGPLNLTDVADG
NGYKTFYKLLLDTDVMTMVNDPLHQPVTLFLPSDRAMAALPQEQKDFLYNTQNRGHLLEY
LKYHILRDTKVYAAELVHIDPIRTLQGSELKANCGGLDNIGEIVLNDGNCRIIQRHLLFN
GGIAYGIDCLLNPPSLGGRCDKKETVDFPLPCAFCTSSTRCPPGSKLKEVKKCDLHMIVN
VNKGCQAICTFVLWQPKCCAGFYGRDCLVCPGGNSSPCLNHGKCDDGHLGNGNCTCDTGF
HGDACELCKEGHYGPDCTACNCTEHGSCEEGLKGTGSCFCEQGWTGQRCETQLAEGPVCS
PTCSQNGICKENNTCVCKLFYEGDGISCIVADLCKFWNGGCAQGAKCSQKGEKVSCACPQ
GHSGDGFICRPIDPCSVDDNGGCHEHATCTMTGPGKKKCVCKDNYIGDGVTCEVKELLVN
RCLQENGQCHSDAQCTDLHYEDSTVGVFHFRSNKGQYKLNYTSAQEACTGEGGTIATYTQ
LSYAQLAGLNLCAASWLDQARVAYPTTYSNPKCGFGHVGIVDYGLRSNLSETWDTFCYRV
KEVKCECKAGYIGDGYSCTGNLLQVLTEKPTFSNFLSQILNYSQMSVSGKQFMKRLSNLT
IQSTLFVPDNTGLYQNQTLTHRDMEYHLSEGRALALKDLTNGSHIRTRLGQSLVVLGIVD
FLNPKALSSSRYINDRFIVDSDILASNGIIHVLQGPLKAPPPWIVLHAGHKAGMGIGVVL
LITLMAGAGFVGYHFYTHKTKPFQFHYFKEEDETPPDCNPAICNPNIVNPTYDSTPATSE
PVPSELPEEDKHQVVEGGPYDLLQDC
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgtgaccggaccactggcgctcatgctgctacttctggggttagaccgctac
acctcctctgctgctgccgccaagaaccggtgtgacaagacaaccctggtgatgaccaag
acagagtgccactcctgtagcatcagctccaacgtgggctgtccagcaggcttcaacaag
aagatccccgggaagggaaacccagactgcaagtaccgtgtgagtcccatggccagtctg
gtgctgaatatcaagggctgttctcatgagtgttacaaggaggtggttgagcctcactgc
tgtccagggtactggggaccagactgcatcgagtgcccagaggacgcagacaggccctgc
agtaataatggactgtgttctgaaggcatgggtggcaacgggagctgcagctgtaagcct
ggcttcgtgggaacagcttgtgaagactgtgcagataatctttacggctcaacctgtagt
tctgcctgcacgtgtggacatggcctgtgtaatgctggtatccacggtgacgggatatgc
acctgcttctctgggtataaaggcccaaaatgtgatctggagctgccggagtgctcttct
ctgctttgtccacagaacactcgctgtatgcagggctcgctggacgggtcgctgcgttgt
caatgtctacctggctaccgaacctctggagatcaatgcatatccataaacccgtgcctg
cagcaggtgtgccacatccatgccacctgtgcccatgtggggcccaacaagcacttgtgt
acctgtgcccagggctacagtggggacgggcacgtgtgtgttcccatagacccctgtcaa
acacacctggggggctgctctgctgactctgcacgctgtgtgtacgatgggccagggaag
tctcattgtgagtgtcaagacgggtttgaccacctgacaggaggggtgagctgcagcctg
aaggacttgtgcagacctaactcttgcagcaaacacgccaactgttcaacagtggagcca
aacatagtagagtgcacatgtcacgagggatacgtgggcaacggcaagatttgctatggc
aacatcatgcagcgtctgaacgatctgaactcagagcccgggggccaatggaccggtcag
ctcagcaatgccatcacactctttggtgccattacttggcccctgagcaactttggcccc
ttcaccatcttcgtcccaatcaacaagggcttcaaaggaactccgctgatacctctgatg
gctgacccaatgaaggctaagtacctgtgtaagctgcacatttctcccgtggagatgccc
tatgacatgctgaacagaggggtcatctactacactctgacgggcaaggcaggggagacg
gtgacaacagatgacgacaagcagctcaagatccgtatccatggcagcaggaagaagggc
ggggtcctgcagtctgatgtcatcgcttccaatgggatcatccatattatcaacaagctg
atggacagtgtctcacccacggtggagagcgacaaagaggagaatctcatgaagattcta
tcagactatgggaagttttccaagttcaaggaattgttgatgaaagccaatgttgattct
gtattggaggaggctgggccctccaccatatttgcccccaccaacacagccttcgatgcc
atgaaggcgggacagctggactatctcacctctagtgagggaagcactaaactactggag
ctactaaggaatcatgtgatcccctcattcaatttggagttctataacgctgtgagcaac
cagcggatgaggaccattgccaatcagatcctctcgttcaatgtgactgaaaacggtcaa
atcctggtcaacggcatggctgtactggaggcagacgtggaggccaagaacggacgcctc
tattcgatggacggagttctaatcccgccctccatcgagccggtactgcctcacaggtgt
gacatcacagagaacaaacttttgaagggtgactgtgtcagctgctcaaaggtgaccaag
tccggctgcccatccggagtgtccacaaacaccttccttcgcggctgtgtgttccggaac
atattgagtttcaacatccttacgtttggctgcgcccccatatgcaacaggaccctcacg
acaccactgtgctgtaagggcttctatgggccagactgcaccccatgtcctggagggttc
aacaccccctgctcccgtcacggacagtgttctgaggggatcgagggaaacgggacgtgt
gtctgcgagaccaacttcaaaggctcccggtgtcactactgctccaaccccaacaaatac
ggaccggcctgcgacaaaacttgtgactgtatccatggtgtgtgtgataaccgtcccgag
gcagacgggcgttgtaaggtggactcctgccagcagggttacactggccagtactgtgag
cgccacacccaggcctgtggcccccaggtgaccttctgtcatgcccgcgcagagtgtaac
ttcaacggaggggcagtcaggtgtgtgtgtaaccctggtttccaaggcgatgggatcacg
tgcgtgtatacagaaccctgtgcccttccgcatcgtggaggatgcgatgtgaatgccaag
tgtataaagacagggccagtctcacacacatgccaatgtttggcaggatggaggatggat
gaggatgggtgccagcctatcaatgactgcctgggccctgacagagggggatgccatccc
aatgccacctgcatctacgtgggccctggacagagcggctgtgcatgcaagagtggtttc
cgtggcaatgggagggagtgcgaggcgagcaatccgtgcgtggcacaaaatggcggctgt
cattatctggcaagctgtctctacgtgtccggtgcatggaagtgtgtgtgtgaggatgga
tacacaggtgacggggaggcgtgctacggcaacgtgggacaggagttgatggcccttcct
gatgtcactgagttcgccaaatgggtgactgacataggcatttcccagctgccactcatg
aacagtcagaacataactctgctggtgccgtccacagcagctacagacaagatgaccaaa
gaggacaaggacttctggacaacccaggggaacctacccagtatcatcaaaaatcacatg
atccaaggtgtctactcactagatgacctacgcgatgcgtcctccaacttgcagctcact
tccgttctgaagaaggctcttcctgttactatgaccaatgagtccacagtgattggagga
gccaccataacaaccgcgaatgtggcttcaaccaatggactgatccacattgttgacacg
gtgttggttccagagaggagtctcagtgaggggctgctggagctgcttgcacggaggcca
gagttctccctgttcaggagttaccttgtccatcacaacctgacagcagagatagagcag
gcctcggcctacacagtattcgctccaatagacggtgctgtcctcgagtacctcaagaat
accgcttcagacaccatggacctgaatacgacgcggtaccacatagtgctgtctgatagg
ttaatgaaggtagacctgctgggtggagcctacaaggagaccatgctggggttctcctac
cagctaggcatcttacccagggatgacaagttgtttgtgaatgaagcccgggtaaatgtg
tcagacatcctgggaggtaaaggggtgatccacggcctatctgcagtactagatatcacc
aaaaatcgctgcgacatccagcaattcaatacatttccgggattgtgtcaagattgcttc
tacccacaactcaactcctgtccaactggcgctaccacaatagcattggtcaggaaaaag
tgtatgttcagtcgggtctaccagggggaacggctgctcagcatcggctgcaggaccatc
tgcaagaacactaccattgtgcggaggtgctgtggcgggttctacggggagcactgtgag
ccgtgtccagggcccaaaggccagccttgctatgggaacgggatgtgccaggacaggacc
aacggtacaggggtttgccagtgtaacaagaacttcaacgggactgcttgtgaaacgtgc
caggagggcaaatacggcatccactgtgaccaagactgtaggtgtaagaacggccggtgc
aacgacggtatccatggagatgggacatgcgagtgtgatgcgtattggagaggggtcgcc
tgtgatgacaagttcaccagagaagagaactgtggggacaggaagtgccacaccagtgca
atatgtgtagtaggtcgctgtgaatgtttggccgggtttcagggcaacggcacggactgc
aaagcgaaagatgcctgcaaagacaataacggaggatgcagtcctcacgctgtgtgtaag
aggactctccctggacgcaggcagtgcgtgtgcaacacgggatatcacggcgatgggatg
gtgtgtgtacagattaacccctgcctggacggtaaaggaggctgccatgtgaatgcagac
tgtattcacaccggacctaacaaaacgtcgtgtgtgtgcagccaaggctacacaggagat
gggaaggagtcttgtacggttatcaacctctgtcgaacgaaacaaagggactgccacagg
tacgccaggtgtaatatgactggtccaggggaacgcagctgcacctgtatggatggatac
atgggcgacggcattagctgtaaaggcactgtgggcaaggagcttctcaccaggaaactg
agggatttctatcttgggttgatgatggcagatatctctctgaagggccggggtccattc
acagtctttgctccaacagctgaggccttcggccagggggagacggcaaaagagttgagg
catccctcaaagagagagaagagggccaagattcttcgctaccacatcgtgtcatgtcac
accctattggccagcgacctgaccacgcccagaaacctgaccactctcatgggagacgtc
ttgaccatcacctactctgagggtaccatcctcatcaacaacctggtgaaagtggtgcac
agtgatgacccgagcatcaatggaatcatccatgagattgacaccttcatgataccagag
agcctgaagaaggctgatgtgatagaggggccattgaacctcactgatgtggctgatggt
aatggttacaagaccttctacaaactgctgttggacacagatgtgatgacaatggtgaac
gaccccctccaccagcccgtgacattgttcctgccgtcggaccgtgccatggccgcactg
ccccaggagcagaaagacttcctttacaacacacagaacagaggacacctgctggagtac
ctcaaataccacatcctccgagacaccaaggtgtatgcagcagagctggtccacatcgat
cctatacggacgctccagggatccgaactcaaagccaactgtggagggctggacaacata
ggtgaaatcgtcctcaacgacgggaactgccgaatcatccagaggcacctcctcttcaac
ggtgggatagcctatgggatcgactgtctgctgaacccgccgagcctcgggggtcgctgt
gacaaaaaggaaactgtagatttcccgctgccctgtgcattctgcacatcatcaacacgc
tgcccccctgggtccaaactcaaggaggtgaagaaatgtgacctgcacatgatagtgaat
gtgaataaaggctgccaggccatatgtacttttgttctctggcaacccaagtgctgtgct
ggcttctacggacgtgactgtctggtttgtcctggcgggaattcatctccctgtttgaac
catggaaagtgtgatgacggtcacctaggcaacggcaactgcacatgtgacactggtttc
catggcgacgcctgtgagttgtgtaaagaaggccactatggaccggactgcacagcatgt
aactgcacagagcatgggtcatgtgaagaaggccttaaagggacaggctcctgtttctgt
gaacagggctggaccgggcagcgctgtgagacacaactagcggagggtccagtctgctcg
ccaacctgctctcagaacggcatatgtaaagagaacaacacctgtgtatgtaaacttttc
tacgagggagacggcatcagctgcatagtggccgacctgtgtaagttctggaacggtggc
tgtgcccagggagctaagtgcagtcagaagggggagaaggtgagctgtgcctgccctcag
ggacactctggagacggcttcatctgtcggcccatagacccttgctccgtcgatgacaac
gggggttgccacgagcacgccacctgcaccatgactgggccgggaaagaagaagtgtgtg
tgtaaggataactacatcggggacggtgtgacgtgtgaggtgaaggagcttcttgtgaac
cgttgtctccaggagaacgggcagtgccactctgacgcccagtgtaccgaccttcactac
gaggacagcacagtcggtgtgttccacttccggtccaacaaaggacagtacaagctgaac
tatacatcggcccaggaggcctgcacaggagaggggggaaccatcgccacgtacacacag
ctctcctacgcacagctggctgggctcaacctgtgtgcggctagctggctggaccaggcc
agagtggcctaccccaccacctactccaaccccaagtgtggctttggtcacgtgggcatt
gtagactacggcttacgcagcaacctcagtgagacctgggacaccttctgctacagggtc
aaggaggtgaaatgtgaatgtaaagcaggttatataggagatggatactcctgcactgga
aacctcctgcaggttctcactgagaagcccaccttctccaacttcctctctcaaatcctg
aactactcccagatgtccgtgtcaggaaaacagtttatgaagcgcctcagtaacctgacc
atccagtccacgctgtttgtacctgataataccggactgtaccagaaccagacactgacc
cacagggacatggagtaccatctctcagagggccgggccttggccctgaaagacctgacc
aacggcagccatatccgcacccggctgggccaaagcctcgttgtcctgggtatcgttgac
ttcctcaaccccaaggccctgagttcctcccgttatatcaacgaccgcttcatcgtcgac
tccgacatcctggcatccaatgggatcatccatgtgctgcagggacccctcaaagcccca
cccccttggatagtgctccacgcgggtcacaaggcagggatggggattggagttgtgctg
ctgatcacgctgatggctggggctgggttcgtaggctaccacttctacacccacaagacc
aaaccgttccagttccactactttaaggaagaggacgagacgcctccagactgcaaccct
gccatctgcaaccccaacattgttaaccccacttatgactccacccctgccacaagtgaa
ccagtaccatctgagctccctgaggaggacaaacaccaggtggtagagggtggcccgtat
gacctgctccaggactgctga
DBGET
integrated database retrieval system