Oncorhynchus gorbuscha (pink salmon): 124013615
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Entry
124013615 CDS
T07892
Symbol
poln
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124013615 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124013615 (poln)
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124013615 (poln)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
124013615 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
TetR_C_6
Motif
Other DBs
NCBI-GeneID:
124013615
NCBI-ProteinID:
XP_046183895
LinkDB
All DBs
Position
LG25:complement(27389871..27466866)
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AA seq
1038 aa
AA seq
DB search
MTTDNQRGMGGGEMEGRVERERKDDINKGGLKKKMERKNSRSSTKPHQQRKVSPSLGQMR
DGEGQGVTETDSHPEERRNMDGPLVTAAQRNSGGNTEPLAAGHFIPKPSQEGGRVFRAPT
LRGTCLGQTSLATNHHNDTQAGDGGSREWGLTIDPALTNPSLAGHGRAAGLGSGLTSIRA
SGEEESSGHHPLLSAQQPPLTPTFSLKSKHGTPLPKIALFRRPVKWEPPQSCQEKARTLQ
RGQEWCKTQTPKHPDLTPAFSLDPRAKTKTLHKTEGTKSVSLTPNPPHRPPANPVRPKQG
VPMGERGLVSTRDHSSSDTPQHRSSKTPKPPKPKRAKPGPNQCQLTPETEPEGGSGAGDP
RAQSNQSKTCLTTAMISDPRVRDAGKLSPEERGRVLEEAGQASALVLTMVYQDGTTQMDP
EQKLSPSVCGVLVMLKRDLDQTGPEEGVAQRTVCLRLEQKPAWAQSHQDHNLDLFNREML
LQVVSGSQLVVCYKAKDLLRTALQHYRPDLHWKQFSSCRIQDPQVAAWLLDPADPSSCFT
NLLTKHCRTPSRTPTPALGARKVYQVISSLSLLYQLNMELRSKLQSQGLWELYSNMELTM
IPVLAAMESHRIHVDTESLKTTSEMLGTKMKQLEHEAHQAAGQMFLVTSSTQLRTVLFEK
LHLQERCENKKLPKTLNKQQQSTSEAVLLQLQDLHPLPKIILEYRQVHKIKSTFVDGVLS
CMTSKNFISSTWYQTSAVTGRISAKHPNFQALPRQPVQITKKQYVQGKEAEVVTVHPRAM
FIPQDGYTFLAADFCQVELRLLAHLSSDPELQRIFNNPQADVFTMLASQWKGVSEGEVSS
EDREHAKRIVYSVVYGAGRERLSGILGVSAEQASHFQDSFLHTYREVQTFIHTTIQQCHK
QGYVVSIMGRRRTLPHIHSTDWGVRMQAERQAVNFVVQGSAADLCKMAMIRIFSQVSSSS
SLSARLIAQLHDELLYEVEDSQVGEFAVLVKNTMESLQHIDCLGVHLKVPLKVAVSSGKS
WGSMSELHLPQTSLPTSS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgactactgacaaccagagagggatggggggtggagagatggagggaagagtggagagg
gagagaaaggatgacatcaataaaggagggttgaagaaaaagatggagaggaagaacagc
aggagtagtaccaaaccccaccagcagaggaaggtgtcaccctcactagggcagatgagg
gatggagagggccagggggtgacagagacggatagtcacccagaagagagaaggaacatg
gatgggccattggtgacagctgcacagaggaacagtggaggaaacacagaacccttagct
gctggacatttcattccaaagccgtctcaggagggtgggagagtattcagagcccccact
ctgcggggcacctgtctgggacagacctccctggctactaatcatcacaacgacactcag
gctggtgatggaggctccagagagtgggggttgactatagatcctgcactaaccaacccc
tctctagctgggcatggaagggccgcagggctggggtccggcctgacctctatacgtgca
agtggtgaggaggagagcagcggccatcaccctctcctctctgcccaacaaccgcccctg
acccctaccttctccctcaaaagtaaacacggcacccctctgcccaaaatcgcccttttc
aggcggccggtgaaatgggaacccccccagtcctgtcaggaaaaagcaaggaccttgcaa
aggggccaggagtggtgcaaaacccaaacccccaaacacccagacctgaccccagccttt
agcctagacccccgagccaagaccaagaccctccacaagactgagggaaccaagagtgtt
tctctaacccctaaccccccacatcgacccccagccaacccagttaggccaaaacagggg
gtcccaatgggggaaagggggcttgtatcaaccagggaccattctagttcagacactcct
cagcatagatcctccaaaacccccaaaccacccaagccgaagcgggccaaacctgggcct
aaccagtgtcaactcaccccagaaactgaaccagaggggggaagcggtgccggtgacccc
cgtgcccagtccaaccaatccaaaacctgtctgactacagccatgatctctgaccccaga
gtaagggatgctgggaagttgagtcctgaagagagaggcagggtgctggaggaggcaggg
caggccagtgcactggttctgaccatggtctaccaggacggaaccactcagatggaccca
gaacagaagctcagtccgtcagtgtgtggggtgctggtgatgttgaaaagagatctggac
cagactggaccagaggagggggtggcacaacgaacagtctgcctcagactggaacagaaa
cctgcatgggcccagagccaccaagaccacaacctagacctcttcaatagagagatgctg
ctgcaggtagtgtcagggtctcaactggtggtgtgttacaaggccaaagacctgctccgt
acagcactgcagcactacagaccagacctacactggaaacaattctcatcttgtcgcatc
caggatccccaggtagcagcctggctattggacccagctgacccatcttcctgcttcacc
aacctgctcaccaaacactgtaggacaccctccagaacccccacacctgccctgggggca
aggaaggtgtaccaggtcatctccagtctgtctctgctctaccagctgaatatggagcta
cgctctaaactacagagccaaggtctgtgggagctgtactctaacatggagctgactatg
atccctgtgctggcagccatggagagccacaggatccatgtggacacggagtccctaaag
acaacatcagagatgctggggactaagatgaagcagctagagcacgaggcccaccaggca
gcaggccagatgtttctagtgaccagcagcacccagctcaggacggttctgtttgaaaag
ctgcatctgcaggagcgctgtgaaaacaagaagctccccaagactctcaacaaacaacag
cagtctacatctgaggctgttttgttgcagctgcaggacctgcaccccctgccgaagatc
attctcgaatacagacaggttcataagatcaagtccaccttcgtcgacggggttctgtct
tgtatgacgagtaagaacttcatctcgtccacatggtaccagaccagtgcagtgactgga
agaatctctgccaaacacccaaacttccaggccctcccaaggcagccggtgcagatcact
aagaagcaatatgttcaaggaaaggaagcggaggtggtgacggttcacccacgggccatg
ttcatcccccaggatggctacaccttcctggctgcagatttctgccaggtggaactgcgt
ctgctggctcacctctcgtcagatcctgagctgcagaggatcttcaacaacccacaggcc
gacgtcttcaccatgctggcctcacagtggaagggtgtgagtgaaggagaagtgagttca
gaggatagagagcatgccaagcgtattgtctactctgtggtgtatggagcaggtagggag
cgtctgtcgggcatcctgggtgttagtgctgaacaggccagccacttccaggacagcttc
ctccacacctacagagaggtccagaccttcatacacaccaccatccagcagtgccacaaa
caaggttacgtggtgtctattatgggccggcgaaggacacttcctcacatccactctaca
gactggggagtccgcatgcaagctgagagacaggccgtcaactttgtggtccaagggtca
gctgctgacctgtgtaagatggccatgatccgtatcttctctcaagtctcctcctccagc
tctctctccgccaggctgatagctcagctccatgacgagctgctctacgaggtggaggac
tctcaggtgggggagttcgcagtgttggtcaagaacactatggagtccctgcaacacatc
gattgtctgggagttcatctcaaagtccccctgaaggtggcggtctcaagtggcaagtcc
tggggctccatgtccgaactacacctcccccaaacatctctccccacctcttcctga
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