Oncorhynchus gorbuscha (pink salmon): 124013670
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Entry
124013670 CDS
T07892
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04310
Wnt signaling pathway
ogo04519
Cadherin signaling
ogo04520
Adherens junction
ogo04916
Melanogenesis
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124013670
09133 Signaling molecules and interaction
04519 Cadherin signaling
124013670
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124013670
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
124013670
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124013670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124013670
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
124013670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
ZNF704_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124013670
NCBI-ProteinID:
XP_046184003
LinkDB
All DBs
Position
LG02:complement(95479672..95548940)
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AA seq
497 aa
AA seq
DB search
MPQLSSGGGDDQGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESETNQSSNA
AAVRRSQQNEHRGYQEKHREHLDSVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPPGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHPTGIPHPAI
MPPSGKLDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKES
AAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRGCAGEKSKA
DWGKKKRRKREKQQDSSADPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWCTSP
TSSDGSAIDSPLSPVDGIPTQPASPLHNLLHLLPSKHTPLILSKSTTTELSFKALIESSQ
QHDNIHHHHDCTLPKSH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggcggaggagatgatcaaggagcaaacgatgaaatgatatcc
ttcaaggatgaaggcgaacaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaaatcaaagttcgaacgca
gcggcggtcagacgaagtcagcaaaacgaacatagaggttatcaagagaaacaccgggag
catctcgacagcgtgtccaaacatcaagatggagggatgtataaaacagcgtatccaggg
tacccgtttctcatgctgcctgacccatacatccccaacggatccgtgtccccatcttcc
aacaaagtttcagtggtccaacagtctcacgggatgcaccccctgacgtccctgctgccc
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagtcagaaa
ggcgttcacaggccccagtcccaagacatctcaggtttctactccctaccccctggcggt
gtaggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctggggccaggcatgcaccccacggggatcccccacccagccatc
atgcccccttcaggcaaactggaccattatgacaggaacatgtacgctaagcctcaccag
gagcccaagcgggagaaggagcccaagaagccggtgatcaagaagcctctgaatgctttc
atgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacactgaaggagagc
gctgccatcaaccagatactgggccgaaggtggcacgccctgacccgggaggagcaggcc
aagtactatgagctggccaggaaggagcggcagctacacatgcaactctaccccagctgg
tccgccagagacaactacgatgcaggccttagagggtgcgcgggggaaaagagtaaagct
gattggggcaagaagaagagaagaaaaagagagaagcagcaggactcctcagcagaccct
ggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggactggtgcggt
ccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgcaccagcccc
acttcttccgatggaagcgctatagactcacccctctcccccgttgacggcatccccact
cagcctgcttcccccttgcacaacctcctgcacctcctgcccagcaaacacacacccctt
atcctctcaaaatccacgaccacagaactgtctttcaaagctttaatagaatcatcccaa
cagcacgacaatatccatcatcatcatgactgtaccctgcccaagtctcactag
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