Oncorhynchus gorbuscha (pink salmon): 124013674
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Entry
124013674 CDS
T07892
Name
(RefSeq) multiple PDZ domain protein-like isoform X1
KO
K06095
multiple PDZ domain protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124013674
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
L27_1
Shufflon_N
Motif
Other DBs
NCBI-GeneID:
124013674
NCBI-ProteinID:
XP_046184013
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All DBs
Position
LG25:32559454..32634318
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AA seq
2085 aa
AA seq
DB search
MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQLLKD
QGGGVTATFGDDLSECYTTAHANGSHPAYPESSTGTQINGKPSPEEFEHIIRSMAQGRYV
THMELVKPLSGGLGFSVVGLRSENRGELGIFVQEIQPGSVAHCDGNLKETDQILAIDGQP
LDQTVTHQQAIGILQRASERVQLTVARGPIPQLASPVVSRTPSAASTLSAYSSAAHWNHV
ETMELVNDGTGLGFGIVGGKTTGVIVKTILPGGIADQDGRLHSGDHILTIGDTDLYGMGS
EQVAQVLRQCGNRVKLVITRGPPEETSIVPMALPTVTEQQGYEEEEAESFDVGLTKNAQG
LGITIAGYVGDKNSEPSGIFVKSITKDSAVEQDGRIHVGDQIIAVDGMNIQGYTNQQAVE
VLRHTGQTVHLKLVRSGFRPDDIPPAVVPSVIVLPPTPGGRDPTLERTDVVDTTTQGEKQ
YQALSGESDDSTVKDQLTKNTRDEAKLTEDEELELMKKWQETLGPSNKVVIAQVEKFSES
SGLGISLEANNGHHYIRSVLPEGPVGRCGKLISGDELLEVNGISLIGETHKEVVRILKEL
PVCVYMACFRPIPLLQSDRDSVQTELDEFSTEPKIKIQGDLSSFLVPGGSEGAATRENVT
EETLGAPLAMWETEIQDIELEKGESGLGFSILDYQDPMDPAKTVIVIRSLVPEGVAERDG
RLLPGDRLMFVNSTNLDNANLEEAVQALKGANIGMVHIGVAKPLPPYNEEDSPSSSSGIS
FFLSSTLLVKESDEEEPAEDHLFRAEPALIDSNEGDLTDERALEHHFSGNEDDTLQASMI
ALHGSTCSADMDYQTTLQSSTPKRSARLDLLTEHPLVTLFGLADDTEPFSPEEKPIVFPL
SRSIGGHALTVDDNALTSSDQYLALHLTQMEPSDLSNSYSPYTDPEPGLNDLGEPVQPLH
FQVESTMAVEDIGEMEGLMKGDEPSVKQSKEEGDEVIITGSHFERTITVVKGNSSLGMTV
STIKDGLGMYIRSIIHGGSINRDGRLGVGDLILVINGESMANLTNTQARAMLRRHSLIGP
DLGSACAPEEDLCPFYVITYVPVEYLEEYKTSLEQPKDDICSDAPLAPIRGIPELPERED
GEGEESELQTATFSNWNQPMKVELKREAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHI
MADSPAGRNGTLKTGDRIIEVDGVDLSDASHEQAVEAIRRAGNPVVFLVQSIVHRPRPKS
RYSPTSSPVIEYSTALKRLPHHMCQSSTTDTNEERVARRNSDKPPKREAGKTSSTTPHLS
LPVVPHVGETDTDTLTEIPDRPSQTEEEDTFGYRWKNISQRYDSLPGLLHMIELEKGKTG
LGLSLAGNRDRSRMSVFVVGIDPSGAAGKDGRVVVGDELLEINGQILYGRSHQNASSIIK
SAPSKVKIIFIRNTDALNQMAVGPVREHGDTLEPQTELETCSSIAPSAIDVDMFKYVQHV
ILLKEEGGFGITFSEDTKDGLVIQSITEKGPAGKNGSIKSGDKLLAVEDKPVMGYTVDRV
HSLLKEAKSSVKLTICTDKSSPLLPHCTGQATSLASIHRISMATLGQSESEPIRSSSRSS
TPGTLASSDPVTCPIIPGCETTIDISKGRTGLGLSIVGGCDTLLGTIIIHEVYEDGAASK
DGRLWAGDQILEVNGIDLRIATHDEAINVLRQTPQRVRLSVYRDEAQYKEEDLWDAFTVE
LNKKPGQGLGLSIVGRRNDTGVFVSDIVKGGVVESDGRLMQGDQILSVNKEDVRNATQEL
VAELLKCGVGPIVMEVGRFKAGPFHSERRFSQNSQMSETGSCKVTPRSLSASSGSLQVDC
DSLQHTNQESLDHQEIRSVEFTKGPTDSLGISIAGGVGSPLGDVPIFIAMINPTSLVVQT
HKLKIGDIIVSICGTATEGMSHSQAVTLLKNATGTVGLQVVAGSDTTVTGPFHEQTATGL
SVSGLTATSIFHDDLGPPQYKTITLDRGPDGLGFSIVGGFGSPHGDLPIYVKTVFGKGAA
SEDGHLKRGDQIMAVNEQSLEGVTHEDAVGILKRTKGTITLTVLS
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacaatggatacccagcgtgccttgcaggcagtggagcggctccaggccaag
ctgaaggagcggggggaggtccccactgaggagaagctaagcttgctcaagtcggtgctc
caaagccccctgttccaccagattctggccctgcagaagtctgtccagctcctcaaagac
caggggggtggtgtcacagcaacatttggcgatgacctgagtgaatgctacacaacagcc
catgccaatggcagccatcctgcctacccagaatcctccactggtacacagatcaatggg
aagccgtctcctgaggagtttgagcacatcattcgctccatggctcaggggcgctacgtg
acacacatggagctggtgaagccgctgtctgggggcctaggcttcagcgtggttggtctg
aggagtgagaaccgcggggagctgggcatcttcgtccaggagatccagcccgggagcgtg
gcccactgcgatgggaatctgaaggagacagaccagatcttggccatagacggtcagccc
ctggaccagacagtgacccaccagcaggccataggcatcctgcagagagcgtctgagcgt
gtgcagcttactgtggccagaggacccatccctcagctggccagccccgtggtgtcccgc
acgccctccgctgcaagcaccctgtctgcctactccagtgcggcccactggaatcacgtg
gagaccatggagctggtcaacgacgggacaggcctgggctttggcattgtgggaggaaag
accaccggtgtcattgtcaaaaccatcctgcctggaggcatcgctgatcaggatgggcgt
ctgcacagtggggaccacatcctcacgattggggacactgacctttatggcatgggcagt
gagcaggtggctcaggtcctgaggcagtgtggtaacagagtgaagctggtcatcaccaga
ggccctccagaggagacctccatcgtcccaatggcgttgcccactgtcacagagcaacag
ggctatgaggaagaggaggctgaatcgttcgacgtcgggctgaccaagaacgcccagggt
ctgggaatcactatcgccggctatgtgggggacaaaaattccgagccctctggtattttc
gtgaaaagtataactaaagacagtgcagtagagcaagatggccgcatccatgtcggggac
cagatcatagccgtggacgggatgaatatccagggctacaccaaccagcaggctgtggag
gtgctgagacacacgggccagacggttcacctgaagctggtcagaagtggcttccgtcca
gatgacatcccacccgctgtggtgcccagtgtgatcgtacttccaccaaccccagggggc
cgagaccccacactggagagaacagatgttgtggacaccaccactcaaggtgagaaacag
taccaggcattgagtggggaatcggatgactccactgtgaaggatcagttaactaagaac
accagagacgaagcaaagttaacagaagatgaagagttggagctgatgaagaagtggcag
gagacgctcggccccagcaacaaagtagtgattgcccaggtggagaagttcagtgagagc
agtggtctgggcatcagtctggaggccaacaacgggcaccactacatccgctctgtcctg
cccgaggggccagtgggccgctgtgggaaactcatcagtggggatgaactgctcgaggtc
aatggaatatccttgattggtgagacccacaaggaagtggtgaggattctgaaggagctt
cctgtctgtgtctatatggcctgctttaggcccatccctctccttcagagtgacagggat
tctgtccaaacagagttggatgaattttccactgaacctaaaattaagatacagggagac
ctcagcagtttcctggttcccggaggttccgagggggcggcaacaagggaaaatgtgacg
gaggagactctgggagctcctttggccatgtgggagacggaaatacaggacatcgagctg
gagaagggagagagtggactgggattcagcatcttggactaccaggacccaatggatccg
gccaagacagtgatcgtgattcgctctctggtgccagaaggagttgccgaacgggatggc
aggcttttgccaggcgatcggctcatgttcgtcaacagcaccaatctggacaacgccaat
ctggaggaagccgtccaggcactgaagggggccaacattggcatggttcacattggggtg
gccaagccactgcctccatacaatgaagaggacagtccgtcatcatcctctggaatcagt
ttttttttatcttcaacactgctggttaaagaaagcgatgaggaggagccagcggaggat
caccttttccgggcagagcctgcattgattgactccaatgagggagacctgaccgatgag
agggcattggagcatcacttctctggcaatgaggatgacaccttacaggcatccatgatc
gccctgcacggcagcacctgcagcgccgatatggactaccagactaccttgcagtcctcc
acacccaaacggagtgctcgcctggacttgttgactgagcatcccttggtgacgttgttc
ggccttgcggacgacactgaacccttctccccggaggagaagccgatcgttttccccctg
tccaggagtattggaggtcacgccctaacggttgacgacaacgcactaactagctccgat
cagtacctggcgcttcacttaacccaaatggagccatcggatctttcaaactcatacagt
ccgtacactgacccggagcctggtttgaatgatttgggggagccggtgcagcctctccat
tttcaggtggagtccaccatggccgttgaggacataggggagatggaaggcttaatgaag
ggggatgagccatctgtaaagcagtccaaagaggaaggggatgaggttataatcactggg
agtcattttgaaaggacaatcactgttgtcaagggcaactccagtctcggaatgacagtg
agcacaatcaaggatggcttggggatgtatatccgcagcatcatccacggaggttccatc
aaccgagacggccgtctgggagtgggggacctaatcctagtcatcaacggcgagtccatg
gccaacctgactaacacccaggcccgcgccatgctccggagacactccctcatcgggcca
gacttgggatctgcttgtgccccagaggaagatctgtgccctttttatgtcattacctat
gtccctgtggagtatctggaggagtataagactagcctggagcagcctaaagatgacatc
tgctctgatgcacctctggccccaataagaggaatcccagaacttcctgagcgggaggat
ggagagggagaggagagtgagttacagaccgccaccttcagtaactggaaccagcctatg
aaggtggagctcaaaagagaagcgggcaagtcccttggcatcagcattgtggggggcaga
gggatgggcagtcgccttagcaacggtgaggtgatgcggggcatcttcatcaaacacatc
atggcggacagccccgccggccgcaatggaaccctgaagactggagataggattattgag
gtggacggtgtggacctgagtgatgccagtcacgagcaggctgtggaggccatccgcagg
gcaggaaaccctgtagtgttcctggtccagagtatcgtccacaggcccaggcccaagtcc
cgctatagccccacttcatcaccagtcatagagtacagcaccgctttaaaacgcttgcct
catcacatgtgccagtcctcaaccacggacaccaacgaggagagagtggcgcggcgcaat
agtgacaagccgccaaagcgggaagcgggaaagacatcgtccaccactcctcacctctct
cttcctgtggttccccacgttggagagacagacacggatactctgacagagattcccgac
agaccgtcccagacagaagaggaggatacgtttggctacagatggaagaacatcagtcag
aggtacgacagcctcccagggcttctccacatgattgagttggagaaggggaagactggc
ctgggccttagcctggctggcaaccgtgaccgctcccgcatgagcgtgtttgtggtcggg
atcgaccccagtggagccgccggcaaagacggtcgcgttgtggtcggggatgaactgttg
gagatcaacgggcagattctgtatgggcggagtcaccagaatgcctcctccatcattaaa
agtgccccatcgaaggtcaagatcatattcatcaggaacacagatgctctcaaccagatg
gctgtgggaccagtgagggagcatggagacacactggagccccagacagagctggaaaca
tgttcttccattgcaccctcggcgatcgatgtcgacatgttcaaatatgtgcagcacgtc
attctgctgaaggaggagggtggattcggcatcactttcagtgaggacaccaaggatggg
cttgtgattcagagtataactgaaaaaggaccagcaggaaagaacggcagcatcaaatct
ggagataaactcctggctgtggaggataagccagtgatgggctacactgtggacagggtc
cactctttactgaaggaggccaaaagctcagtgaaattgactatctgcacagacaagtca
tcgccccttctccctcactgtactggtcaggcaaccagcctagccagcattcatagaatc
tccatggctaccctgggccagtctgagtcagagccaatcaggagctctagccgttcatct
acccctggcactctggcttcctctgaccctgtgacctgtcccatcatccccggctgtgag
accaccatagacatctccaagggccgcacaggcctgggcctcagcatcgtggggggctgt
gacactctactggggaccatcatcattcacgaggtctatgaggacggagctgcctccaag
gatgggagactttgggctggggaccagatcctggaggtgaatggcattgacctgcgcatc
gccactcatgatgaagctatcaacgtgctgcgccagacccctcagcgggtgcgtctcagt
gtttacagggacgaggctcagtacaaggaggaggacctgtgggatgccttcaccgtggag
ctgaacaagaagcccggccagggcctgggcctcagtatcgtggggagaaggaacgacaca
ggggtgtttgtgtccgacatagtgaaagggggcgtggtggagagtgacgggaggctgatg
cagggagaccagatcctgtccgtcaacaaggaggacgtcagaaatgccacccaggagtta
gtggccgagctgctgaagtgtggtgtgggacccatagtaatggaggtgggcagatttaaa
gccgggcccttccactctgagaggaggttctcacagaacagtcagatgagtgaaacaggc
agctgcaaggtgacccctcgctctctgtcagcctcctctggaagcctccaagtggactgt
gacagcttacaacacacaaatcaggagtcactggaccaccaggagatcagaagtgttgaa
ttcactaagggcccaactgattccttgggcatcagtattgcgggtggagtgggcagtccc
ctgggtgatgtgcccatcttcatcgccatgataaaccctactagccttgttgtccagaca
cacaaactcaagatcggtgacattatcgtcagtatctgtgggactgctactgagggtatg
agccacagccaggccgtcaccctgctgaagaacgctaccggcaccgtcgggcttcaggtg
gtagcagggagtgataccacagtgaccggcccctttcatgagcagaccgctaccggactc
tcagtctcaggtcttactgctactagtatcttccacgatgacctgggacctcctcaatat
aagaccatcacactggacagaggcccagacggactgggcttcagcatcgttggtggcttc
gggagcccacacggagacctgcccatttatgtgaaaaccgtgttcggaaagggggcagca
tcagaggacggacatctgaagcgaggggatcagattatggctgttaacgaacagagtctg
gagggggtcacccacgaggatgccgtgggcatcctgaagaggaccaaaggaacaatcacc
ctgactgtgctttcctag
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