Oncorhynchus gorbuscha (pink salmon): 124013794
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Entry
124013794 CDS
T07892
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124013794
Transcription factors [BR:
ogo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124013794
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
124013794
NCBI-ProteinID:
XP_046184279
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Position
LG25:complement(23901912..23907685)
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AA seq
289 aa
AA seq
DB search
MYNMMEHELKPSGQQQSHQTAMSPVTGNSHPGSKSLCPPGGDPMDKVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYKYKPRR
KSKPLLKKDNQMGKYPLSAGNLLAAAQGQGGSPRMESYGWGPAGGYAGMQSEALGYTQQL
HRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSHQQPNPVMSMVKPEPVSHSPTGGPN
HHRGPLQGDLRDMISMYIPGGDTADPVSQRGGYSVQQHYLSGTVPLTHI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaacacgagttgaagccctctgggcaacagcagtcgcaccaaacc
gccatgtctccggtcaccggcaactctcacccggggtccaaatccctgtgtcctccgggc
ggggaccccatggacaaagtcaaaagacccatgaacgcattcatggtctggtctaggggc
cagcgccgcaagatggcccaggagaaccccaagatgcacaactctgagatcagcaagcgg
ctgggcgcggagtggaagttactgactgatgctgagaagcggccattcattgacgaagca
aaacgcctcagggcggtgcacatgaaggattaccccgattacaagtacaaaccacgccgt
aaatccaagcccctgctcaagaaggacaaccagatgggaaagtaccctctctctgccggg
aacctgctggccgccgcgcagggccaaggtgggagccccaggatggagagttacgggtgg
ggcccggcgggaggttacgccgggatgcagagcgaggccctgggctacactcagcagctg
caccgctacgacctgtccgcgctccagtacccccaggccatgaccgcagcacagacgtat
atgaacggcgccaacacttacagccccatgtcttacagcagcagccaccagcagcccaac
ccagtcatgtccatggtgaagccagagccagtgtcgcactccccgactggtggacctaac
caccaccgcgggcctctccagggggacctgcgggatatgatcagtatgtatatccccgga
ggggacaccgctgacccggtctcccagagaggcggctacagcgtccagcaacactatctc
agtgggactgtgcctctcactcatatctag
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