Oncorhynchus gorbuscha (pink salmon): 124013812
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Entry
124013812 CDS
T07892
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00061
Fatty acid biosynthesis
ogo00071
Fatty acid degradation
ogo01100
Metabolic pathways
ogo01212
Fatty acid metabolism
ogo03320
PPAR signaling pathway
ogo04146
Peroxisome
ogo04216
Ferroptosis
ogo04920
Adipocytokine signaling pathway
Module
ogo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124013812
00071 Fatty acid degradation
124013812
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124013812
09143 Cell growth and death
04216 Ferroptosis
124013812
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124013812
03320 PPAR signaling pathway
124013812
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogo01004
]
124013812
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124013812
Enzymes [BR:
ogo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124013812
Lipid biosynthesis proteins [BR:
ogo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124013812
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of breast milk
124013812
Exosomal proteins of breast cancer cells
124013812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124013812
NCBI-ProteinID:
XP_046184321
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All DBs
Position
LG02:complement(96852202..96955031)
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AA seq
723 aa
AA seq
DB search
MLAFVLISGSIWIILELSSTLMERMQTQELQSSLQLPELDELNQFFRSLPISTLVGIGAL
TAVLAYWLATRPRAISPPCNLQHQSEEVAHEDGVRRSMLGDSPNNLLTHYHEDAKTMYEV
FQRGLHIAGDGPCLGSRLPEKPYKWLSYKEVTTRAEYLGSGLLSQGCTPCPDQFIGVFAQ
NRPEWIISELACYTYSMVVVPLYDTLGPDAIRYIINTADIVTVICDKPEKAQVLLGNVER
QETPGLKRIILMDPFDPALLEEGAGCGVIVQSMQDVEDLGRDNHRKPLPPTPEDLSIVCF
TSGTTGNPKGVMLTHGNVVADFSGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIQSVVY
CHGGRIGFFQGDIRLLSDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPLKRWLLNFAAK
RKGAEVSRGIIRMDSLWDKIFFSKIQASLGGRLRMIVTGAAPASPTVLGFLRAALGCQVY
EAYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFARKGEGEVCVKGPNV
FKGYLKDPERTAETLDTDGWLHTGDIGRWLPNGTLKIIDRKKHIFKLAQGEYISPEKIEN
IYIRCEPVTQLYVHGDSLQSCLVAIVVPDPETMPAWALKKGMEGSYRDLCKNTVLKKAIM
EDLQRLGKASGLHSFEQVKNIHIHNEQFSIQNGLLTPTLKAKRPELREFFKEKIEDLYEN
ISM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccttcgttctgatctctgggtctatctggattatattagagctgagttccacc
ctgatggagaggatgcagacccaggagctgcagagcagtctacagctgccagagctggat
gagttaaaccagttcttccgctccctgcccatctccacactggtgggcatcggtgccctg
accgccgtgctggcctactggctggccacacggccacgtgccatctctcctccctgcaat
ctccaacaccagtctgaagaagtggcgcatgaagatggggttcgcaggtccatgctgggg
gacagccccaataatctgctgacacactaccacgaggatgccaaaaccatgtatgaggtg
ttccagagaggcctccacatagccggtgatggaccttgcttaggctcccggctacccgaa
aagccttacaagtggctgtcctataaagaggtcacaacccgggcggagtacttagggtcg
gggctgctgagccagggctgcacgccgtgcccagatcagttcatcggagtgtttgcacaa
aacaggccagagtggatcatttcggagctggcctgctacacctactctatggtggtggtg
cctctgtatgacacactagggcctgatgccatacgctacatcatcaacactgcggacatc
gtcacagtaatctgtgacaagcctgagaaggcccaggtgcttttgggtaacgtggagagg
caggagacccctgggctgaagagaatcatcctgatggacccctttgatcctgccctgctg
gaggagggggcgggctgcggggtcatcgtccagtccatgcaagatgtggaggatctgggc
agagacaaccacagaaagcccctgccacctacaccagaagatctgtccatcgtgtgcttc
accagtggtaccacaggaaacccaaagggagtcatgctgacacacgggaatgttgtggct
gatttctcaggcttcctcaaagtgacagataaagtaatattcccaaaccaagacgacgtt
cttatctccttcctgcctctggcgcacatgtttgaaagactcatccagtctgtggtgtat
tgtcacggtggccggatcggtttcttccaaggcgacatccgcctgttgtctgatgacatg
aaggccttacggcccaccatcttccctgtggtacctcgactgctcaaccgcatgtacgac
aagatattcagccaggccaacaccccattgaagcgttggctgctgaactttgcagcgaag
agaaaaggggcagaggtcagcagggggatcatccgcatggacagcctgtgggataagata
ttcttcagtaagatacaggccagcctgggtgggaggttacgcatgattgtaactggagct
gcgccggcctcccccactgtactggggtttctcagggctgcactgggttgtcaggtgtat
gaggcgtatggccagacagagtgtactgctggttgtactttcaccactcctggagactgg
acctcaggtcatgtgggggcaccattgccatgtaacctcatcaagctggtggatgtggct
gagaagaactactttgcacgcaagggagaaggagaggtgtgtgtgaaaggacccaatgtt
ttcaagggctacctcaaagaccctgagaggactgctgaaaccctggacacagacggttgg
ctccacaccggagacatagggagatggttacctaacggtacactgaagatcattgacagg
aagaagcacatctttaagctggcccagggagagtacatctcccctgagaagatagagaac
atttacatccgctgtgagcctgtgacccagctctacgtccatggtgacagcctacagtcc
tgtctggttgccatagttgttcctgacccagagacaatgcctgcatgggccctgaagaaa
ggcatggaggggagctatcgggacctctgtaaaaatactgtcctgaagaaagccatcatg
gaagacttgcagagactgggcaaggccagtggcctccactcgtttgagcaggtgaaaaac
atccacatccacaacgagcagttctccatacagaatggcctgttgactcccacactaaaa
gcgaagagacccgagctgagggagtttttcaaggagaagattgaagacctgtacgaaaac
atctccatgtga
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