Oncorhynchus gorbuscha (pink salmon): 124013829
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Entry
124013829 CDS
T07892
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124013829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124013829
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
124013829
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
124013829
NCBI-ProteinID:
XP_046184350
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Position
LG02:96911182..96915627
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AA seq
331 aa
AA seq
DB search
MPVSRMRMRPWLEDKIESNSISGLVWVDKDKKIFSIPWKHAARHGWDLNKDACLFKQWAM
HTGKFIQGETTPDPKTWKANFRCAMNSLPDIKEVKDKSINRGSGAVRVYKMLNVSTKPNN
KRSKAKDAKQNDKGLKIKTEEMDNSATHCLKDRNTNTHLQEDRKIQENKVDSSDNLGETI
TAASYVNDPDVPDFITSVEIGPDSINYYSSFQVSPDHSTDYEDLNEETLIEIAQHWEQLE
QLELPGSVNSKGFLSNEVATVESYNTAESNHSPESQWSDNSGSEIELRLYTELSPGLPMA
EDLVSYADHWALNNTLNNNTTSYLQQISCPL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgaggccttggctggaggataagattgagtccaactcc
atcagtggattggtgtgggtggacaaggacaagaagatattctccatcccatggaagcat
gctgcacgtcatggatgggacctgaacaaggatgcctgtctattcaagcaatgggccatg
cacacagggaaattcatacaaggcgagactacaccagaccctaagacatggaaggctaat
ttccgctgtgcaatgaactcccttcctgacatcaaggaggtgaaagacaagagcatcaac
agagggtcaggagcggtgcgcgtttacaaaatgctgaacgtcagcacaaagccaaataac
aagaggtcaaaagcaaaggatgcaaagcaaaatgacaaggggttaaagatcaagacagag
gaaatggacaacagtgcaacccattgcctcaaggatcgcaacaccaacacacacctgcag
gaggacagaaagatacaggagaacaaagtcgacagctcagacaacctaggggagaccatc
acagcagcgtcatatgttaatgaccctgatgttccagactttatcacctctgtggaaata
ggaccagacagcatcaactactactcgtctttccaagtgtcaccggatcactccacagac
tatgaagatttgaacgaagaaacacttattgagattgcacagcattgggagcaattggag
caattggagctgccaggcagtgtaaacagcaaggggttcctgagcaatgaagtagctaca
gtagagtcatacaacactgcagagtctaaccacagtccagagagccaatggagtgataac
tcagggtcggaaatagagctgcggttatacacagaactgagcccaggcctaccaatggct
gaagatctcgtctcttacgccgaccattgggctctgaacaacacactgaacaacaacacg
accagttatctccaacagatctcttgcccactttga
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integrated database retrieval system
