Oncorhynchus gorbuscha (pink salmon): 124013896
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Entry
124013896 CDS
T07892
Name
(RefSeq) cGMP-gated cation channel alpha-1-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124013896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124013896
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124013896
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GFIT
Motif
Pfam:
CLZ
Ion_trans
cNMP_binding
DUF6033
DUF3464
Tim54
GrpE
Connexin
Sec62
Motif
Other DBs
NCBI-GeneID:
124013896
NCBI-ProteinID:
XP_046184403
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All DBs
Position
LG25:complement(51060943..51085222)
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AA seq
553 aa
AA seq
DB search
MTVRLLVGKEKQEKRERKEQKKKEKEEKELKEKEEKEKKEKEEKAKAEAPKEITVIDPAG
NMYYNWLLVITIPVMYNWTLIIARASFEELQTDFLIYWFIIDCVSDVVYLADMVFRTRTG
YLEQGLLLFGLNYPEIRLNKLFRINRMLEFFQRTETRTNFPNVLRISNLVMYIVIIIHWN
ACLYYSFSKAIGFGANKFVYPDTTDPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVQNSE
YFFVVTDFLVGVLIFATIVGNVGSMITNMNAARANFQARIDAIKQYMTFRKVTKDLEKRV
IKWFDYLWTNKKAVDEREVLKFLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLK
LQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVAGDGIKQFVVLSDGELLREISILSIKG
SRAGNRRTANIRSVGYSDLFCLSKDDLMEALSEYPDAKAMLEEKGRQILMKDNLLDLEVA
AQGPDPKDMEEKVERMTATLESLQTRYARLLAEHEAGQSRLKRRVTRLEKKVVAPVQEVE
ELGVEMGTVATTE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgtacgtctactggtagggaaagaaaagcaggagaaaagggagagaaaggaacag
aagaagaaggagaaagaggagaaggagttgaaggagaaagaggagaaggagaagaaggag
aaagaggagaaggccaaagctgaagcgcctaaagagatcacggtgatagacccagcaggt
aacatgtattataactggctccttgtcatcactattcctgtaatgtacaactggaccctc
atcatagccagggccagttttgaggagctccagacagactttctgatctactggttcatc
atagactgtgtctctgatgtggtctacctggctgatatggtgttcaggaccaggacaggt
tacctggaacagggtctgttgctgttcggactcaactaccccgagatacgactcaacaag
ctgttcagaatcaacaggatgttggagttctttcagaggacagagaccaggaccaacttc
cccaacgtactgcgtatctccaacctcgtcatgtacatcgtcatcatcatacactggaac
gcttgtctttactactctttctccaaggcgattggtttcggagctaataagtttgtgtac
cccgacacgacggaccctgagtttggccgtttggtccggaaatatgcctacagcatgtac
tggtcgaccctgacactcacaactatcggagagactcctccccctgtacagaactctgag
tacttcttcgtcgtcacagacttcctggttggcgtgttgatctttgctaccatcgtcggt
aacgtcggttccatgatcaccaacatgaacgctgccagggcaaacttccaggccaggata
gatgccatcaaacagtacatgactttcagaaaggtcaccaaggacctggagaagagggtg
atcaagtggtttgactacctgtggaccaataagaaggcagtagatgagagggaggtgcta
aagttccttcctgataaactcagggctgagattgctatcaacgtacacctggacacactg
aagaaggtgcgtatctttgctgactgtgaggctggtctcctggtagagttggtattgaag
cttcagcctcaggtctacagtccaggagattacatctgtaagaagggagacatcggacga
gagatgtacatcatcaaggaagggaagctggccgttgtcgccggcgacgggatcaaacag
ttcgttgtccttagcgacggggagctacttcgggagatcagtattctgtccataaagggt
tccagggctggaaacaggaggactgctaacatcaggagtgttgggtactctgacctgttc
tgcctctctaaagacgacctcatggaggccctgtcggagtatcctgatgctaaagccatg
ttggaggagaagggacggcagatcctgatgaaggacaacctgctggacttggaggtggcg
gcgcagggcccggaccccaaggacatggaagagaaggtggagaggatgacagcaacgctg
gagtccctccagacgcgatacgcccggctcctcgccgaacacgaggcgggccagagcaga
ctgaaacgcagagtcacccggctggagaagaaagtggtggctccggtccaggaggtcgag
gagctaggggtggagatgggtaccgtggcaaccacagagtag
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integrated database retrieval system
