Oncorhynchus gorbuscha (pink salmon): 124013900
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Entry
124013900 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124013900
03036 Chromosome and associated proteins [BR:
ogo03036
]
124013900
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124013900
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124013900
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124013900
UBL E3 ligases
124013900
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124013900
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124013900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124013900
NCBI-ProteinID:
XP_046184407
LinkDB
All DBs
Position
LG25:51549118..51600254
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AA seq
850 aa
AA seq
DB search
MAPTKMKLRVRRRESGGGGQEQEEPSKTSSQSVSAEASPDSKCPICLDRFNNMSYLDRCL
HRFCFQCIQEWSNNKVECPLCKQPFSSILHSIKAQDNFKEFTLRPPPVPGENGTAMIAAA
EAAAAAALVTARVGGSHGERRRTRRRGGGQGRGGRERRQSGRLWRGRGLSSAPPLPPLHP
PLLPRPEDGGMRGEMDGEDPGVIFDGLTGVSAPPPHDRGVQRLMVRLAARRRSQREGRSV
RMLRPREMLSFRRALYRSGVRVRNARGGCERPRDITAAFYQRNPVALHRLLPWLQRELTV
LYGAHGSLVNIVQRIITSRIARHDMEGGGGAIQDELRPFLLARTDHFLHELISFARSPLS
MEVYDQLSIYDPPAPSYEDRMTSSSSDTDDSVIAISDEEEEAGGSEGERERRPVSVAGSS
ALSQSAWDDETPGPSYSTAEPSQSPMPLSISPGGRDSGPAGANQNPALDMTAAANGERVE
EGGEEEEEEQCMIVGFVKAMAERTPELVQLSSDPSDEEGEKQETKETVPQTVLTPLSLVV
PPLSIPVPPMSLFINTSTERPGGGGERPGGGGERGLGVRHLDREREQVEERLLYCPLGER
REGRHRERSCSGSRSRSRHRSASVWSRSGRSRSSERSWSARSPVSVRSDDSSQERRRKRR
AREREKRRQEKGRGRDSHDRGSHDRGSHDRGSHDRGSHDRGSHDRGSHDRGSHDRGSHRQ
HSREHRRETSGGSERIRGRERERITYEPARSQYSNTGIFFSPENSVLSHSPSLSRSSQRG
PESPGEHRHSRSSDSLSSSSSLSHLSAHRQHSRHSPRSDKPGGKRKYKTRHLEDPSWEPS
SSARRERGRG
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcccctaccaagatgaaactgcgtgtccggcggcgggagagcggaggaggtggtcag
gaacaggaagaaccctctaagacctcctctcagtcggtgtcggccgaggcgtctcctgac
tctaaatgcccaatctgtctggaccgtttcaacaacatgtcttacctggacaggtgtctc
catcgcttctgcttccagtgcatacaggagtggagcaacaacaaggtggaatgtcctctg
tgtaaacagccgttctcctccatccttcactcgatcaaggcccaggacaactttaaagag
tttactctcaggcctcctcctgttccaggggagaacgggacagcaatgatcgcagctgcc
gaagcagccgccgccgctgccctggtgaccgccagggtcggtggtagtcatggagaacga
aggaggacgaggagaagaggaggggggcaggggagaggagggagagagaggagacagtca
ggacgactgtggagagggaggggcctctcttctgctcctcctctccctcctcttcatccc
cctcttctacccaggcccgaggatggaggaatgagaggagagatggatggagaggacccg
ggggtcatctttgatgggctgactggcgtgtccgcccccccacctcacgatcgaggggtg
cagcgtctcatggtacgtctggctgctaggcgacggtcccagagagaggggcggtccgta
agaatgctccgaccacgggagatgctttccttccgccgggcgctctaccgcagtggcgta
cgtgtcaggaacgcccgcggcggctgcgagaggccccgtgacatcactgctgcgttctac
cagcggaacccggttgctctccatagactcctcccctggttacagcgggagctgacggtg
ctgtacggcgcccacggctcattggtcaacatcgtccaacgcatcatcacctcacgaatc
gcacgtcacgacatggagggagggggtggggccatccaggacgaactccgtcccttcctg
ctggcgaggactgatcacttccttcacgagcttatcagttttgcacgttcccctctcagt
atggaagtgtacgaccagctgtccatctacgaccctccagcgccgtcctacgaggacagg
atgacatcatcatctagcgacactgacgactctgtcatcgccatttcggatgaagaggaa
gaggcaggagggtcggagggagaacgagagagacggccggtgtcggtagcaggaagtagc
gctctgagccaatccgcttgggacgatgaaacaccaggaccctcctactctaccgctgag
ccgtcccaatcccccatgccgctctcgatcagcccaggggggagggactctggtccagcg
ggggctaatcagaatcctgctctggacatgacagcggcagcgaatggagagagggttgag
gagggaggagaggaagaggaggaggaacaatgtatgatagtagggtttgttaaagccatg
gctgagagaactcctgaactggtccaactctcctcggacccctcagacgaagagggggag
aaacaggagacgaaagagactgttccccaaacagtgttaacccctctctctctcgttgtc
cctcccctctccattccagttccccccatgtctctgtttataaacaccagcacagaaaga
ccgggaggagggggggaaagaccgggaggagggggggaaagaggactgggagtaagacat
ctagacagagagagagagcaggtagaagagagactcctctattgccctctaggggagaga
agggagggcagacaccgagagcggtcgtgctcaggatcgcggtccagaagcagacatcgg
tcagcgagcgtttggtcgcggtccggtcggtccaggagttctgaacggagctggtcagca
cggagccccgtgtctgtacggagcgacgacagcagccaggaacggcgccggaagagacgg
gcgagagagcgggagaaaaggagacaggagaaaggaagaggaagagattcccacgacaga
ggctcccacgacagaggctcccacgacagaggctcccacgacagaggctcccacgacaga
ggctcccacgacagaggctcccacgacagaggctcccacgacagaggctcccatagacaa
cacagtagagagcacaggagagagaccagtggaggaagtgagaggattagaggtagagag
agagaaaggattacatatgaaccagccaggtcccaatattctaacacaggaatattcttt
agtccggaaaacagcgtcctatcccattccccgtccttatcccggagtagccagcgagga
ccagaatctcctggggaacaccggcattcccggtcctctgacagcctctcttcctccagc
tccctgtcccatctctctgcacacagacagcattcccgacattccccacgctccgacaag
ccgggagggaagaggaaatataagacacggcatctggaagacccttcctgggagccatca
agctctgcacggagagagagggggcgaggg
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