Oncorhynchus gorbuscha (pink salmon): 124013908
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Entry
124013908 CDS
T07892
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124013908
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
124013908
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124013908
NCBI-ProteinID:
XP_046184420
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All DBs
Position
LG25:8071265..8076986
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AA seq
778 aa
AA seq
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MSLLSTKKLRCYFPHLFNLIEKTGYAVATMLGTSTSTEQGAMENPIVLEMCRMSPLTFVD
TPELISSVAPDTVEGLIKAKKKKNKALSEQGPEEPAIEHNQKDGHRLTVEKRGKDPKHKE
QTVTELEVVEKERKKVIKGNEEKQPNFIQDEMEVPDPEEQTGGKTKKKSKNLQTQQVGAD
LVIADENNMNSRKKKRKHNDIEPERVIDSVLSKAEVDVSAVTAPDEVRKSKKKHKNRQTE
LEEGGESCLTVSRTAEDPEIIELHPETVKRGKNVVTEAEENVKKRKRNKKKHTESELNDC
PDKADLPGIKEQTERKLKSKRPKTDGESAAVEVSGRKKKHRRVSDKGMDSVHSAADVLDL
AVPNDNRTHDAGTNGETEGAHSTMVKTGTQHNKSCLKKETLVVDDWQALNDLKDFIPNVE
SKSVDEIHKWTKYDLDRFKEFRRQGLSLRSGRFNAQENERLKSNVSDFLSLTGIQSGSEL
FHPQRFKEEEANIKKLKRQHRFHERIGEGIPRPWHQIYIRGRKMFDGSNYKGRFTEEELH
TLKKLHALHGNKWAKISALTGRSESALEKRFAQMSANRGAWTEEELKRLMEAVRKHLVGQ
AEPGSGPATVRKDQLYNNIPWTDVCQTVETRHWSQCRIKWLGVLKHKMAYGQPVFSRHTK
SLQGKVDLIKALNAMQVEDVADINWEEIARTIGDVTPRYVQTNYYRLKVANVPLWQSMSF
CEIIDFLNSRVLPNCEERLNVLIKSGEVVSRNDPQELFLLSEIFDNEDGDYYSDVQNS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgtcaacaaagaagttacggtgttactttccccacttgttcaacctgata
gagaaaacaggttatgctgtagccaccatgctggggacttcaacatccactgaacagggg
gctatggagaatcccatagtgcttgagatgtgtcgaatgtcccctcttacatttgtagac
actcctgaattaatctcatcagtggcacctgatacagtcgagggattaataaaagccaaa
aagaaaaagaataaagcactatctgaacagggaccagaagaaccggcaattgagcataat
caaaaggatggtcaccggttgacagtcgagaaaagaggtaaagaccctaaacataaagag
caaacagtgactgagctggaagtggtggagaaagagaggaagaaagtaataaaaggaaac
gaagagaagcagccaaattttattcaagatgaaatggaggtaccagatcccgaggaacaa
actggagggaaaacaaagaaaaagtctaagaatcttcaaacacaacaggtgggagcggat
ttagtgattgctgatgagaataatatgaatagccggaagaagaagagaaaacataatgac
attgagccagaacgggtgatagacagtgtcctctcaaaggctgaggtagacgtttcagct
gtaactgcgccagatgaggtcagaaagagtaagaagaagcacaagaacagacaaacagaa
cttgaggagggaggggaaagctgtctgacagtttcaagaacagcagaggatccagaaatc
atagaactgcaccctgaaacggtcaagagaggtaaaaatgtggtaactgaggcagaggag
aatgtaaaaaaaaggaaacgaaataagaaaaaacacacagagagtgaactgaatgattgt
ccagataaagcggaccttccaggtataaaagaacagactgaaagaaaattgaagtcaaag
aggccaaaaacggatggagagtctgcagctgtggaggtcagcgggagaaagaaaaaacac
cgcagagtgtcagacaagggaatggacagtgtccactctgcagcagatgttttggattta
gctgttccaaatgacaacaggactcatgatgctggaacaaacggtgagacagagggtgcc
cattcaaccatggttaagacagggacccaacacaacaaatcctgcctaaagaaagaaact
ctcgttgtggacgactggcaggctctgaatgatctcaaagacttcattcccaatgttgag
tcaaagtctgttgacgagatccataagtggacaaagtatgatcttgatcgattcaaggaa
ttccgaagacaaggcctttccctgcgaagtggaagattcaatgcgcaggagaacgaacga
ctcaagagtaacgtctccgacttcctgtctctcactgggattcagagtggctctgagctc
ttccatccacagcgcttcaaagaggaagaagcaaatatcaagaaattgaagaggcagcac
agatttcatgaaagaataggtgaaggaatacccaggccttggcatcaaatctacatacgt
gggaggaaaatgtttgatggcagcaactacaagggcaggttcaccgaagaagagcttcac
actttgaaaaaactacatgcgttgcacggcaacaagtgggcgaagatctcggcgttgact
ggccgaagcgaatcggccctagagaaacgttttgctcaaatgtccgcaaacagaggcgcg
tggaccgaggaagaactgaaaagactaatggaagctgtgcggaagcacctggtgggacag
gcagagcctggcagtggaccggccaccgtcaggaaagaccagctgtacaacaacatcccc
tggacagatgtgtgccagacggttgaaacgcgccactggtcccagtgtcgaataaaatgg
ttgggtgttttgaagcacaaaatggcatatggacaaccagtattcagtagacacactaaa
tcattacagggcaaagtggatttgatcaaagccttgaatgcaatgcaggtggaagatgtt
gcagatatcaactgggaagaaattgctcgcacaattggggatgttacgccgcgctacgta
cagacaaactactataggctaaaggtagccaacgttccgttgtggcagagcatgtccttc
tgtgagatcatcgacttcctcaacagtagagttctccccaattgtgaagagcgcctcaac
gttctgataaagtcaggagaggtggtgtccagaaatgatcctcaagagctctttctactc
tctgagatatttgataacgaggatggcgactactacagcgacgttcagaacagctga
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