Oncorhynchus gorbuscha (pink salmon): 124013986
Help
Entry
124013986 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124013986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124013986
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124013986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
124013986
NCBI-ProteinID:
XP_046184563
LinkDB
All DBs
Position
LG25:26327690..26350886
Genome browser
AA seq
1443 aa
AA seq
DB search
MSLRPPTSTLDRLSSLTIGDSERKTSSGQQREPLADFPTESTGQGLVQRCVVVQKDQLGF
GFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSGTYVAL
TLQGPPPSAAALPTDLLPNQRTSLGGEAPPPPPPPLSPGLTSNPSQRITKPLQNLDVQKH
ATQILRNMLEQGEAELQDLMEELLLNPSPSLEERIESAKRRAQQVRVKIQQDLDGTRLES
VTSYVVAGEGRLSGDSSEGDFEACESPHSSPSTSTFRTPLYRRQGSDTHTFSDSAGKAQI
IGPEEEEEEDDSYPLNEMDGPFQDIELLKSRPAHMTVFMRYLFSQLLDPNPLLFYLSVEV
YLGSSPKDARALAPQICSHFLDADAPLKIRVREEYLSDIESRLHAQEDIRGPLSELQQQV
LPDIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPAKERLVVDRQVTALWEILSKHEEES
SSRLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLSFFPKTKKLSSSKKEKDGEDRKRN
PILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHTEIPGEEGAEGDPPRLSSS
SLGEDSMDSPTVSMRLARSESLKAQGEGRRRGGSSGAETVPRSRSDVDMEDCGEESEGPG
LRPLHHSTSSASSSSARSCENPTPPYTPRSSRRKSVEFPVALLPDAPALEEDVVDSHNWQ
ETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVFFQKMRCVLSSDELACIF
PNLPQVYELHASLCEAMKKRRESPIVQGIGDIMLARFEGVAGEEFQEQASHLCSQQSQAL
ELIKNKQRKDPRFAHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLLLDNILKHTEAGS
TDLPPLQQAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPTPQFKSLDLTSKRMIHEG
PLTWKVSKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRFLGGGGGGSGDTKASFSPV
VQLDSLLVRSVATDNKALYVISTTEQQIYELVAGTSSEKNIWKDQLEKTISLAAGSSPST
NNRSTPIFSPSLGNASPVSTGSHVYQSDDSMTEQAVSMGTNSPNDEDNELTPTTPTAQSG
AFLHTEGRDYVKKQIGVAEAALEDVEILKRLIFHNFEEVGWSHDSDGMPTNETANERSPL
NDRQRLASSDTLLSASPSQLEAEHSEAPPSEVGSPSVHVVRKAVVAGSPSIPDDITDVNL
HSDQSPEPRGGASVRGNVFYLVMPTEQGDGLLDESHTDEVIDPPTLTSTELPDLDQEVMS
SNIKHHEEEGQVSSTLSAGKQLEPENLRREGGLGQSQKVLQSYVIKHVDEIFHTIEELMS
KLHQLRDIETAHHQLLKTLREPPVNQDSDDLPCNQVTVVRTQSLDRNPGDAEPAKPEILS
TGF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcccccccacctcaacactggacaggctcagcagcctgacgataggagac
tcggagcgcaagacctccagcggccagcagagggagcctctggccgacttccccactgag
agcacaggtcaaggtctggttcagagatgtgtggttgtacagaaggaccagctagggttc
ggcttcactgtgtgtggcgagaggatcaagctggtgcagaatgttcgaccaggtggcgca
gcggtcaaggcaggggtccacgagggagacagaatcataaaggtcaatggctcgctggtg
tcgtccatgtctcatcaggaagtggtgaagctcatcaagtctgggacatatgttgctctg
actcttcaaggaccgcccccttcagcagctgccctccccactgacctcttacctaatcag
cggacgtcactgggaggagaagccccgcctcctccacctccacccctctcccccggactg
accagcaacccctcccaaaggatcaccaaaccactgcagaacctagatgtacagaaacac
gccactcagatcctcaggaacatgctggaacagggagaggctgagcttcaggacttgatg
gaggaactgttactgaacccctccccatccctggaggagcgaatcgaaagtgccaagcgg
cgggcccaacaagtcagggttaaaatccagcaagatctggatggaactcgattggaatct
gtgaccagctatgtcgtagcaggagaaggtcggttgtcaggggattcaagtgaaggagac
tttgaggcctgtgagagcccccactcctccccctccacctccaccttcaggacccccctc
taccggagacagggctctgacacacacacattctccgactcggctgggaaggctcagatc
attggcccagaggaagaggaggaagaggacgacagctatccgctcaatgagatggacggc
ccatttcaggacatagaacttctcaagtcgcgaccggcccacatgaccgtgttcatgaga
tacctcttcagccagctactggatcccaacccgctgctgttctacctgtcggtggaggtc
tacctgggctctagccctaaagacgcccgtgccctcgccccacagatctgctcccacttc
ctggacgctgatgctccgttgaaaatcagagtacgagaagaatacctgtccgatatagag
agtcgactccatgcccaggaggacatcaggggacctctttctgagctccaacagcaggtg
ctgcctgacattcaggaccaaatacaggattacaggagtaagcagatgatgggtctgggt
tctctgtttggagagggagacctgcagcagctggatggagacccagccaaggagaggcta
gtggtggacagacaggtcactgctctctgggaaatactctcgaagcacgaagaggagagc
agttctcgtctagcctctgcggtgctgctgtacctccgtcactcaggcataaagctgagg
gactccagggtgttcccaggcctcagcactgagaaggagaagtggctctccttctttccc
aagaccaagaagctgagcagttcaaagaaagagaaggatggagaggacaggaagagaaac
cccatcctgaagtatatcggcaagcccaggagcacctctcagtccaccttccatgtcccc
ttgtctcccactgaagtgcgcccgggcagtgtgaggaacatcatccagcagtttgagaac
cacacagagatccccggggaagagggggccgagggagaccccccgaggctctcctccagc
agcctgggagaggacagcatggacagccccacggtgtcgatgcgtctggctcgtagtgag
tctctgaaggcgcagggggaggggcgtcggcggggtgggtcctcgggggcggagacagtc
cctcggtcccgtagcgacgtggacatggaggactgtggagaggagagtgaagggccgggc
ctgagacccttacaccacagcacctcctctgcctccagtagctcagcacgatcctgcgag
aaccccacccctccgtacacccctcggtcttccagaagaaagagtgtggagttcccggtg
gccttgctccctgacgccccagccctagaggaggacgtggtggacagtcacaactggcag
gagactgtggccccgcaggtcctggctactctctgtccccgagaggtggacagacaggct
gtcatctatgagttgctgacgacggaggcgtctcacctgcgtacactcagggtgttggat
caggtgttcttccagaagatgaggtgtgttctgagctctgacgagctggcctgcatcttc
cccaacctgcctcaggtctacgagctccacgctagtctgtgcgaagccatgaagaagaga
cgagaatctcccatagttcagggcatcggcgacatcatgctggccaggtttgagggcgtg
gcgggggaggagtttcaggagcaggcgtcccacctgtgcagtcagcagtctcaggccctg
gagctcatcaagaacaaacagcgcaaagacccccgtttcgcacacatcatccaggagtgt
gaggccagtccacactgtaggaggctgcagctgaaggacctgctggtgtctgagacgcag
agactcaccaagtaccctctgctactggacaacatcctcaaacacacagaggctggttcc
acagacctccctcctctccaacaggctcaagcctgttgccgggggatattgcaggccgtc
aacgaggttgtcagggagacggaacaccggcagcggctcaaccaataccagcgcaggttg
gaccccacgccacagttcaagagtctggacctgaccagtaagagaatgattcatgagggt
cctctcacctggaaagtcagtaaagacaaaaccttggagatccaggcgctgctgttgtca
gaccttctggtgttgctccagagaggtccagacgaccggctgctgctgcgctgcccgtcc
cgctttctgggggggggaggtgggggtagcggggataccaaggcctccttcagccccgtg
gtccagctagactcactgctggtgcgctctgtggccacagataacaaggccctgtacgtc
attagcacaacagagcaacagatatacgagctggtagcagggacgtcctcagagaaaaac
atctggaaggaccaacttgaaaagaccatctcattggctgctggctcctcaccttcgacc
aataacagatccacacctattttctccccgagtcttggtaatgcttcccctgtctcaact
ggcagccatgtctaccaatcagacgactcgatgacggagcaggcagtttcaatggggaca
aactctcctaacgatgaggacaatgagctcacgcccaccacaccaacggcacaatcaggg
gctttcctccacactgagggacgggactacgtcaagaagcagattggagtggctgaggca
gctcttgaagacgtggagatactaaagcggctgattttccacaactttgaggaagttggg
tggagtcacgactcggacggaatgcccacaaacgagacagccaatgagaggagcccgctc
aatgacagacagagactggcgtcctctgatactcttctcagtgccagtcccagccaattg
gaggctgagcattccgaagccccgccctcggaggtggggtcccccagtgtacatgttgtg
aggaaagctgtggttgcgggctctccttctatccctgatgacatcactgatgtcaacctc
cactccgaccaatcacctgagccgagaggcggggccagtgtacggggaaacgtgttctac
ctggtgatgcctacagagcagggagatggactgctggatgagagtcacacagatgaggtc
attgatccccccaccctgacctccaccgaacttcctgatctggaccaggaagtgatgtca
tcaaacattaagcatcatgaggaagaagggcaggtctcttccaccctgtctgctggcaaa
caattggagccagaaaatctgaggcgggagggagggcttggccaatcacaaaaggtcctc
cagagctatgtgatcaaacacgtggatgagattttccacacaatcgaggagctgatgagc
aagctgcaccagctgagggatatcgagacagctcatcaccagctgctgaaaacactaaga
gagccgcctgtcaatcaggattcagatgatctcccttgcaaccaggtaaccgtcgtcagg
acgcagtctctggaccggaacccaggggatgcagagccagctaagcctgagatcctctcc
actggattctaa
DBGET
integrated database retrieval system
