Oncorhynchus gorbuscha (pink salmon): 124013992
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Entry
124013992 CDS
T07892
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124013992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124013992
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124013992
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124013992
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124013992
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124013992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_11
PH_21
PH_8
PH_17
DUF7412
Motif
Other DBs
NCBI-GeneID:
124013992
NCBI-ProteinID:
XP_046184574
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Position
LG25:31646704..31667103
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AA seq
767 aa
AA seq
DB search
MTVKLDFEECLKDSPRFRAAIEVVEGDVCELETRLEKLVKQCHSMLEAGRAYCQTSKSFV
TGLKELGHHCSGDNMMGECLEKFSKKLAVILEAQGEVIESTQKSVKLKLLSFVKEDVRRF
KDVRKEFERGSESLEAALGRNAQAPRGKQHEVEEVSHALLNARKTFRSGALDYVLQINVI
EAKKKTDILMAMVSMMDAQSQFFQQGHQSLSELDDYRRTLSEEHTQLVLNSAREKRDMEQ
RHEAIKKKDVSYDNSLMDFCADAANGIAMEGYLYKRASNAFKTWSRRWFSIQKNQLVYQK
KFKDQPTVVIEDLRLCTVKVCVDNERRFCFEVVSPSKSCLLQADSERQQQGWISAVQNSI
ASAFQERREDPHSPREHCSSVSGGSPGGGGLCGEQEKTGGREALEEVQAIPGNMQCCDCG
EPGPDWASINLGITLCIVCSGIHRSLGVHFSKVRSLTLDSWEPELVRLMCELGNTAINRI
YEGRIDEITIKKPHPSSPRGDKESWIRSKYVEKKFIQKLPETGRKAPLRRSSARRNRANT
QERPAGSRPPLKPKPTRATLPRLAGLNQSDLVQENNTGIHKDDEDDEEEDLSGLHPGALL
YRSAALQHFPVMADALAHGADVNWVNTAEESSTPLLQAVTANSLAACEFLLQNGANVNTA
DSNRRGPLHHATILGHTGLVCLFLKRGADYNARDNNQKDPITIAVETANADIVTLLRIAK
MNKEMREMDGAFGQSGDETYQDIFRDFSHMASNNPEKLKRRSTDFKT
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaaactggattttgaagagtgtctcaaagactccccccgattcagggccgcc
atcgaagtggtggaaggagatgtctgtgaattggaaacgcgattagagaagctggtgaag
cagtgccactccatgctagaggctggcagggcctactgtcagaccagcaagagctttgtc
acagggctcaaagagctgggccaccactgttctggggacaacatgatgggggagtgtttg
gagaaattctccaagaagctggcagtgattctggaagctcagggggaagtgattgaaagc
acacagaagtcggtgaagttgaagttgctgagttttgtgaaagaggacgtgcgtcggttc
aaggatgtgcgtaaggagtttgagcggggtagtgagagtctggaggcagcattggggagg
aacgctcaggccccccggggaaaacagcacgaggtagaagaggtcagccacgccctcctc
aacgcccgcaagaccttccgctccggagccctcgactacgtactgcagatcaatgtcatc
gaggccaagaagaagacagacatcctgatggcgatggtgtctatgatggatgcccagtcc
cagttcttccagcaaggtcaccagtccctctcggagctggacgactaccgtcgcaccctg
agtgaagagcacactcaactagtgttgaattccgccagggagaagagagacatggaacag
agacacgaggccattaagaaaaaggatgtgtcctatgataactccttaatggatttctgt
gctgatgccgccaacggtattgccatggagggctacctgtataagagagctagcaatgcc
ttcaagacctggagcaggcgctggttctccattcagaaaaatcaactggtctatcagaag
aaattcaaggatcagcccacagtagtgattgaggatctgcgtctttgtacagtgaaggtc
tgcgttgacaacgagagacgattctgcttcgaggtggtctctccatccaagagctgtttg
ttacaggcagactccgagcgccagcagcagggctggatcagtgctgtccagaacagcatt
gcttcagccttccaggaacgcagagaagacccacacagtcccagggagcattgcagctct
gtgtcgggaggcagcccaggaggaggagggctgtgtggggagcaggagaagacggggggc
cgcgaggctctggaggaggtccaggccatcccggggaacatgcagtgctgcgactgtgga
gagcccggtccagactgggcctctatcaacctggggatcaccctctgcatcgtctgctcg
gggatacacaggagtctgggtgtccatttctccaaagtacgctccctcaccctggactcc
tgggaaccagagctggtccggttgatgtgtgagttgggaaacacagccatcaacaggatc
tacgaagggcgaattgatgagatcaccatcaagaaaccccacccctccagtccaaggggt
gataaggagtcgtggattcgttctaagtacgtggagaagaagttcatccagaagctcccg
gagacgggacgtaaagctcccctgcggcgctccagcgcacggaggaacagggctaacacc
caggagaggccagctgggtcacgacccccactcaaacccaaacccacccgggccaccctg
ccacgactcgcagggctcaatcagagtgaccttgtccaagagaacaatacgggcattcac
aaagatgatgaagatgacgaagaggaggacctgtctggtcttcatcccggggcgttgtta
tatcggtctgcagcgctgcagcatttccctgtcatggccgacgccctggcccacggagct
gatgtcaactgggtcaacacagccgaggagtccagcaccccactcctacaggccgtcacc
gcgaactccttggcagcgtgtgagttcctgctacagaacggtgccaatgtcaacacagca
gacagcaacaggagaggacctctacaccacgccactatactgggacacactgggcttgtg
tgtctgttcctgaagcgaggggcggactacaacgccagagacaacaaccagaaagacccc
attactatcgccgtggagacagccaacgctgacattgtcaccctgctgcgaattgccaag
atgaacaaggagatgcgggagatggatggagcctttggccaatcaggtgatgaaacgtac
caggacatcttcagggacttctctcacatggcatctaacaacccggagaaactcaaacgc
cgcagcacagactttaaaacttga
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