Oncorhynchus gorbuscha (pink salmon): 124014080
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Entry
124014080 CDS
T07892
Name
(RefSeq) LIM domain-containing protein ajuba-like isoform X1
KO
K16682
LIM domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124014080
03036 Chromosome and associated proteins [BR:
ogo03036
]
124014080
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124014080
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
124014080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
124014080
NCBI-ProteinID:
XP_046184737
LinkDB
All DBs
Position
LG25:complement(27887197..27897229)
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AA seq
726 aa
AA seq
DB search
MDRLGSKLLEKLKLTDSGSVKFASSKKKNELVNNTNNNSNGNTSSGLPPTLSTVTSSPST
PGQFSLTSPTSTESCRPASGRGGNGLGERVSATQHLSPSTSSIAPQTADCEHQPYSLSTL
APLRRRSPQQRASCYLGEGVDIQMRRESGLGDCDPAGSKASLNQRRYSLELQQLVRRQQL
LSHPPLPPSSGPPPAYPTSSTSSGYGSAPRGGAMAELHYLPEPERHKRLSLQEALFYKRL
SAGGELWESTRPASLSHPPHRPSEMGGGGGVGGGFFFPPGPTLSPCSSFSLQESVLVSPR
SSFASSTASGGSPMGSRCSSNRTSGISLGYDTRYSAAPQLQFSSLHAGGSTSGQGYTVSG
RAGAHSGSGGWQDYLDGVSSPGGTGVQDSRHSYPPAVGSPAAACYRAGPEWWDERGAGTA
RGEETGVGAGRERARYSDLPGTRYQEELTRLLLRDAALEGEGLHLGGLMLKEHAKALSKP
VTLVNTATAAGPIKAQEEPGTGREALSENRQEFFGTCVKCGKGVYGADNACQALDSLYHT
RCFTCVSCGRTLRNKDFYNVNGSVYCKEDYMFSGFQAAAEKCSVCGHLILEQILQAMGNS
YHPGCFRCVVCSKALDGVPFTVDHLSNIYCVSDYNRSTCRSILPLELLLPRRTFAPKCAA
CLQPILPAEGSEEILRVMSMNNDYHFECYHCEECGKQLSDQQGSQCFPLDSHLLCHSCHM
TRVCAS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaccgacttggaagtaagttattggagaagttgaaattgactgactcagggagtgtg
aaattcgccagttctaaaaagaaaaacgagttggtcaacaacaccaacaataacagcaat
gggaacaccagtagtggactgccaccaaccctgagcactgtaacctcctcaccatcaaca
cccggccagttctctctcacctctccaacctcaacggagtcatgcagaccggccagtggc
agaggtgggaatggactgggagagagagtctccgctacccagcacctctccccctctaca
agctccattgccccccaaactgctgactgcgaacatcaaccctactccctctcgactctc
gccccccttcggcggcggtcgccccagcagcgtgcctcctgctacctgggggagggcgtt
gacatccagatgaggcgtgagtcaggcctgggggactgtgacccggctgggtccaaggcc
tctctgaaccagcgccgctactctctggagctccagcagctggtccgacgccagcagctc
ctctcccaccctcctctcccaccctcctctggcccccctccggcataccccacctcctcc
acctcctcgggttacggctccgctccccgtggtggcgcaatggccgagctgcactacctc
cccgagccggagcgccacaaacgcctctccctccaggaggcgctgttctacaagcggctg
agcgccggaggggaactctgggagagcaccaggccggcctcgctctctcaccccccacac
cggccctctgagatgggtggaggaggaggggtgggtggaggtttcttcttccccccaggc
ccgacactgagcccctgctcgtccttcagtctccaagagtcggtgctggtcagtcccagg
tccagctttgcctccagtactgccagcggtggaagccccatgggcagccgctgtagcagc
aaccgcaccagcggaatcagcctgggctatgacacccgctactccgcggcaccgcagctg
cagttctcctctctgcacgcagggggctccaccagtggacagggatacacagtctctggc
agggccggggcacactctgggtcaggaggctggcaggactacctggacggggtctcttca
cctggaggaacaggggttcaggacagtcggcattcatacccgcctgcggtgggtagcccg
gcagcggcctgttaccgggctgggcccgagtggtgggatgagaggggagcaggaacagca
cgaggggaggagactggcgtgggcgctggcagggaacgggcgcgctactcggacctcccg
gggacccgctaccaagaggaactgacgcgcctgttgctaagagatgcagcactggagggg
gaggggctacacctgggtggtctgatgctcaaagaacatgccaaggccctcagcaagccg
gtgacgctcgtcaacacagctacggctgccggaccaatcaaagcccaggaggagccagga
acggggagggaggcgttgtctgagaatcgccaggagttctttggtacatgtgtgaagtgt
gggaaaggtgtgtatggagcggataatgcgtgccaggctctggacagcctctatcacaca
cgctgcttcacctgtgtgtcctgtggtcgcaccctgagaaacaaggacttttacaacgtc
aatggctctgtgtactgtaaagaggattacatgttctcagggttccaggctgcagcagag
aaatgcagtgtgtgtggccaccttatcctggaacagatcctccaggcaatggggaactct
taccaccccggttgtttccgctgtgtggtgtgttccaaagccctggacggagttcccttc
accgtcgaccacctcagcaacatctactgtgtctcggactacaacaggtctacatgtcgt
tctattctgccattggaactcttgttgccccgcagaacgtttgctcctaaatgtgctgcc
tgcttacaacccatcttacctgctgagggcagcgaggagatactccgggtgatgtctatg
aacaacgattatcactttgagtgctaccactgtgaggaatgtgggaagcagctctcggat
cagcagggctcccagtgcttccctctggactctcatctcctctgccattcatgtcacatg
acccgggtgtgcgcctcataa
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