Oncorhynchus gorbuscha (pink salmon): 124014094
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Entry
124014094 CDS
T07892
Name
(RefSeq) low-density lipoprotein receptor-related protein 10-like isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124014094
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124014094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
PBSX_XtrA
Motif
Other DBs
NCBI-GeneID:
124014094
NCBI-ProteinID:
XP_046184756
LinkDB
All DBs
Position
LG25:27950713..27966886
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AA seq
1064 aa
AA seq
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MTVSFNLCVINILFVTAYSSLELVSSTGFFSLPAHCGRSPQVLEAARGEIRSFVHRSSSY
RPRPFYCSWIIKAHVGEPVILSFSQFSTRCKKEWVSVTSSTGKPITLCGSDLPKPMELMG
GNITVTHHFLPHLFPVSAFRLGYVRDSGDCTGVDFECLGGRCLPLSWRCNGRVECLGEGV
GLGIDEQDCDGEMKILNLDPEHGKTVVATTTPESYRARETGREKNGGSNSRGRDWETVGK
APGELEKEEEETEKQVDENGDHTKEKEPTNPIYDFWQFQAHRAHPSVTRAPVEWPCGGLL
QAFYGTFTPPSIRGPSLFCVWTLDPQESRPLKLDLRLLELGPGDTVTITDRQQGTGELLK
TITSASNYKAIQVESRTGLLSLTYRTLPGSEGLGFNATYRVGGYCPPWEGKCGGAEGVCY
TQEQKCDGHWDCPETGYDEAGCRGCPRDQFACGGAGQRALLAGHSFLGRPVCFPAKERCN
YQLYCSDGSDERDCSICQPGTFHCDSDRCVFESWRCDGQLDCKDGTDELNCTVTLPPKVV
TCGGLLQTFYGTFAPPSIRGPPLFCVWTLDPQDSRPLKLDLRLLELGPGDTVTITDRQQG
TGELLKTITNASNYKTIQVESQTGLLSLTYRTLPGSEGLGFNATYRVGGYCPPWEGKCGG
ATGGCYTQEQKCDGHWDCPETGHDEAGCRGCPRDQFACGVAGQRALLAGHSFLGRPVCFP
AKERCNYQLYCSDGSDERDCSICQPGTFHCDSDRCVFESWRCDGQVDCKDGTDELNCSVT
LPRKVITAATVGSLVCGLLLVIAMGCTCKLYSLRTREYSMFAPISRQEAALIQQQAPPSY
GQLIAQGIIPPVEDFPTENPNESSSLTLRGILQLLRQDTANSPRRRRRPRFVRRAVRRMR
RWGLIPRTASRPSQPSSSAPQQTDPTSTGAEPSQSTPATSSLAVEAVNLPLPQKLGLLPQ
TVQHPPPPPASLPPPLVSISAIPQSFPVAAPPTPSSPSLASLFHSLGRGISRFRASPFSS
SSPTNSLPLSASPTFSSSEDEVLLIPLSEDMTSEDDVPLLTLDP
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctctttcaacctttgtgtcatcaacattttgtttgtaacggcctacagcagc
ctggagctggtctccagtactgggttcttctctctcccagctcattgtggacgatctccc
caagtcctggaggctgcgagaggagagatcagaagctttgtgcaccgcagctcgtcctac
cgccctcggcccttctactgtagttggatcatcaaggcacatgtaggagagcctgttatt
ctcagtttctcccagttttccacacggtgtaagaaggaatgggtctcggtgacgtcatcg
actggcaagcccattaccctctgtggttccgacctgccgaaacccatggagttgatgggg
ggaaacattacagtgacgcaccacttcctgccacacttattccctgtgtctgcgttccgc
ctgggctatgtcagagactccggggactgtacgggtgtggactttgagtgtttgggtggg
cgctgcctgcccctgtcgtggcgttgtaacggccgggtggagtgcctgggtgaaggggtg
ggcctgggcatagacgagcaagactgtgatggagagatgaagatcctgaatctggatcct
gagcatggcaaaacagtggtggccaccaccacaccagagtcctacagggcgcgggagacc
ggaagagagaagaacggggggagtaacagcagagggagggattgggaaacagtagggaag
gcaccgggagagctggagaaagaggaggaggagacagagaagcaagtagacgagaatggg
gaccacaccaaggaaaaggagccaaccaatcctatatatgacttctggcagttccaggct
cacagagcccaccccagtgtgacccgggcccccgttgagtggccctgcgggggcctcctc
caggccttctatgggacgttcacccctccttccatcaggggcccctctctgttctgtgtg
tggaccctggacccccaggagtctaggcctctgaagctggacctgcggctgctggagctg
gggcctggagacacggtcaccatcactgacagacagcagggcaccggggaactcctcaaa
actatcaccagcgcgtccaattacaaggccatccaggtcgagtcccggaccggcctcctc
tccctgacctatcgtacgctccccggctctgaggggctaggcttcaacgccacctaccgt
gtcgggggctactgccccccctgggaaggtaaatgtgggggtgccgagggggtctgctac
acccaggaacagaagtgtgatgggcactgggactgtcccgagacgggatatgacgaagca
gggtgcaggggatgtccccgggaccagtttgcctgtggaggggctgggcagagggcactg
ctggcggggcatagcttcctagggcgtccggtgtgtttccctgccaaggagaggtgtaac
taccagctgtactgttctgatgggagtgatgagagagactgttctatatgtcaacctggg
accttccactgcgacagtgacaggtgtgtttttgagagctggcgctgtgacggccagctg
gactgcaaggacgggacagacgagctgaactgcaccgtgaccctacctcccaaggtcgtc
acctgcgggggcctcctccagaccttctatgggacgttcgcccctccttccatcaggggc
ccccctctgttctgtgtgtggaccctggacccccaggactctaggcctctgaagctggac
ctgcggctgctggagctggggcctggagacacggtcaccatcactgacagacagcagggc
accggggaactcctcaaaactatcactaatgcgtccaattacaagaccatccaggtcgag
tcccagaccggcctcctctccctgacctatcgtacgctccccggctctgaggggctaggc
ttcaacgccacctaccgtgtcgggggctattgccccccctgggaaggtaaatgtgggggt
gccacggggggctgctacacccaggaacagaagtgtgacgggcactgggactgtcccgag
acgggacatgacgaagcagggtgtaggggatgtccccgggaccagtttgcctgtggagtg
gctggtcagagggcactgctggcggggcatagcttcctagggcgtccggtgtgtttccct
gccaaggagaggtgtaactaccagctgtactgttctgatgggagtgatgagagagactgt
tctatatgtcaacctgggaccttccactgcgacagtgacaggtgtgtgtttgagagctgg
cgctgtgacggccaggtggactgcaaggacgggacagacgagctgaactgttccgtgacc
ctgcctcggaaggtcatcaccgcggcaaccgttggcagcttggtctgtgggctgttgctg
gtcatcgctatgggctgcacctgcaagctttactcactgcgcacccgagaatacagtatg
tttgctccaatcagccgccaagaggcggcgctgatccagcagcaggctcctccctcctac
ggtcagctgattgcccagggcatcatccctccagtggaggacttccccacagagaacccc
aacgagtcttcctctcttactctgagaggtatcctccagctcctcagacaggacaccgcc
aactctccacgtcgccgtcgccggccccgattcgtccgccgggctgtccgtcgcatgcgg
aggtggggcttaatccctagaaccgcctccaggccctcccagccttccagttccgccccc
cagcagacagatcccacctctactggtgcagagcccagtcaatcaactcccgcaacttcc
tcattggctgtggaagccgtcaatctgccgttgccacagaaactaggcttgctccctcag
acggtgcagcacccaccaccgcctcccgcctcccttcctccacccctcgtctctatctca
gccatcccccagagcttccctgtggctgcccctcccacccccagtagcccctccctggcc
tcgctcttccactctctggggcgcggtatctctcgcttccgcgcctcaccgttctcctcc
tcctcccccaccaactccctgcccctctccgcatcccccactttctcctcttcggaggat
gaggtgttgcttatccccctctcggaggacatgacctcggaggatgacgtccccctgcta
acccttgatccctga
DBGET
integrated database retrieval system
