Oncorhynchus gorbuscha (pink salmon): 124014102
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Entry
124014102 CDS
T07892
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124014102
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124014102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
TPR_BSK1_C
TPR_16
TPR_12
TPR_9
TPR_17
ARM_TT21_4th
ANAPC3
TPR_10
Motif
Other DBs
NCBI-GeneID:
124014102
NCBI-ProteinID:
XP_046184767
LinkDB
All DBs
Position
LG25:7745850..7751290
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AA seq
664 aa
AA seq
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MSENKAIELQLQMRQNAEDLHNFMKDLNSWETDIKKKDEQLRSGSVGESQKSLPPVRNKD
YKKKREKKKASDNNAKTETKQAPRIKSYDYQSWDKFDVDKVLESMDKEDSAAESNDSESE
DSGVPATDQDTALAEKEKGNQLFKEGKYDDAIECYTRGMGADPYNPVLPTNRAACFFRLK
KFAVAESDCNLSIALDSNYFKAFARRGAARFALQHYESALEDYVMVLKLDPGNLEAQNEV
MKCKEVIAKLGGKAESPEAAVVMPPVVDVKQQQLMEEQQRRQEAVVQKDRGNAYFKEGKY
EAAVEYYTKGMEADSTNVLLPANRAMAYLKLQRYKEAEEDCSKAIALDGTYSKAFARRGT
ARAALGLLKQAIEDFEEVLKLEPGNKQALHEMKKIAIDMGTSGLLATEEHAQRRTVLPVN
KPPHLQSTKPLRRVDIEEVGGKILVQKEPSAVFTSTTAPCFRPQKTTSIPDTVRECQGEA
SPPSTSPSAKILKIEEISNIPSHSPVKWPGGGAVRAQTQKHREATVSEPTELPATPSTEV
VPPAPTNSFQLEADLRKIGNGPEVIYKYLKQIQPQAYAKIFQSSLEPDILNQILRTLRSF
YIKKEEPPVILEILRNLAGVRRFDMAVMFMSIPEKKVLQELFDFLRQAGLEDVSVGALQK
KYGV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacaaagccattgaactccaactgcaaatgcgacaaaatgcagaggacctg
cataacttcatgaaagatcttaacagctgggaaactgacataaagaagaaggatgaacaa
ctaagaagtgggagtgttggcgagtctcaaaaaagcctcccaccagtgcgaaacaaggac
tacaaaaagaagagggagaaaaagaaggcatcagacaacaatgcaaagactgaaacaaaa
caagcacccaggataaagtcttatgactatcagtcatgggacaaatttgatgtggacaag
gttttggagtccatggataaagaggacagcgctgctgagtccaatgactctgaatctgag
gattctggggttcctgctactgaccaagacacagctcttgctgagaaggagaaaggtaat
cagctgtttaaagaagggaagtatgatgatgccattgagtgttacaccagaggcatgggc
gcagacccttataaccccgttctgcctacaaaccgagctgcctgcttctttagactcaaa
aagtttgctgttgcagagtctgactgcaacttgtccatcgctctggacagtaactacttc
aaagcatttgcacgaagaggagcagctcgattcgccctgcaacattatgaatctgcccta
gaagattatgtaatggtgctcaagctggatcctgggaacctggaggcacagaatgaagtg
atgaaatgcaaagaggtcattgctaaactgggtggaaaggcagaaagcccagaggctgca
gtggtgatgccacctgtggtggacgtcaagcaacagcagctcatggaggaacagcagagg
agacaggaggcggtggtgcagaaagacagggggaacgcatacttcaaagaagggaagtat
gaggctgcagtagagtactacaccaagggcatggaagcagacagcaccaatgtcctcctg
cctgccaaccgggccatggcttacttaaagctgcagagatataaagaggccgaggaggac
tgcagtaaagctatagccctggatggcacctactcaaaggcctttgcccgcagagggaca
gctagggctgctctgggactgctaaaacaagctatagaagattttgaggaggtcctgaag
ctagaaccaggaaacaagcaggcattacatgagatgaagaagattgcaattgacatgggc
accagtggtctgctggcaacagaggagcatgcacagcggagaacagtactgccggttaac
aaaccacctcacctgcagtcaaccaaaccattgaggagagtggacattgaggaggttggt
ggaaagatccttgtccaaaaggagccctctgctgtgttcacttcaaccacagccccctgt
tttaggccccagaagaccacctccatcccagacactgtgagagagtgtcagggtgaggcc
tcacctccctctacctcccccagtgctaagatcctgaagattgaagaaatatcaaacatc
ccctcacattcccctgtcaaatggcctggggggggtgctgtgagagcacagacacagaag
cacagggaggcaactgtcagtgaaccaacagaactgcctgctacaccctcaactgaagtc
gtacctcctgcccccaccaacagcttccagctagaggcagacctaaggaagattggaaat
ggccctgaagttatctacaagtatttgaagcaaatccagcctcaggcgtacgcaaagatc
ttccagagttctcttgagccagacatactcaatcagattttgaggacgttacgaagcttc
tacatcaagaaggaagagccacctgtcatactggagatcctcaggaatctggccggtgtg
aggcggttcgacatggctgtcatgttcatgtccatccccgagaagaaagttctacaagaa
ttgtttgactttcttcgtcaagctggacttgaggacgtttcagtaggagccctgcaaaag
aagtatggagtgtga
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