Oncorhynchus gorbuscha (pink salmon): 124014184
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Entry
124014184 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124014184
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124014184
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_6
U-box
zf-ANAPC11
Exonuc_VII_L
DUF4618
TMEM214
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
124014184
NCBI-ProteinID:
XP_046184900
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All DBs
Position
LG25:complement(4005275..4007893)
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AA seq
477 aa
AA seq
DB search
MAARFSLPEEHLCCPVCCDIFRDPVVLKCSHSFCAACLEQYWSGKGSARDCPLCRREFVD
EPVASLTLKNLCDSYIQESGALGPTGELCEPGELCSLHGEMLKLFCLQDKEPICVVCHTS
RKHKNHECCPVGEAIGDMKEEIKSVLTCLQEKKEAFDKMKQNYDNTVTHIQVQARFVAKR
IHEEFETLHHFLQAEEAARLAALKEEEESKSEMLRQSMREMDRTLASLSDTIRAMEEEMA
LEDTFFLQKCKQTVRSVQSSTLQDPVMVPGALIDVAKYLGSLQYKVWEKMQGIVKYTPVT
LDPNTAAPWLLLSEDLTSVRDSDDKRKLPDNPERFDPDTGVLGSEGFSSGKHVWDVEVGE
NSAWVLGVAKESIQRKDKVSSVLKNGYLSVYFYHKMYFAGTSPLTRLNLKKSPQRIRVQL
DWEKGRVCFSDPADNTQIYTFKHNFSERVFPYFWVGCKQCPLRIEPLEVSVKAVDHT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagattctctctcccagaggagcacctctgttgccctgtgtgctgtgatatt
ttcagggatcctgtggtcctcaagtgcagccacagtttctgtgcagcctgcttagagcag
tactggtctgggaaggggtcggcccgggactgcccactctgtaggagggagtttgtggac
gagccggtggccagcctcaccctgaagaacctgtgtgactcctacatccaggagagtgga
gcacttggacctacaggggagctgtgtgaaccgggtgagctgtgctccctgcacggggag
atgctgaagctgttctgtctgcaggacaaggagcccatctgtgtggtctgtcacacctcc
aggaagcataaaaaccatgagtgctgcccggtgggagaggctataggtgacatgaaggag
gagattaagtctgtgcttacttgtttgcaagagaagaaggaggcttttgacaaaatgaag
caaaactatgacaatacagtgacacacattcaggtccaggcccggtttgtggcaaagagg
attcatgaggagtttgagacgctccaccatttcctccaagctgaagaggctgctaggctt
gcagctctgaaagaggaggaggagagtaagagtgagatgttgaggcagagtatgagggag
atggacagaaccctggcctccctctctgacacaatcagagccatggaggaggagatggct
ttggaggatactttttttctccagaaatgcaagcagacggtgagaagtgttcagtctagc
acactgcaggacccagttatggtcccgggagcactcatcgatgtggccaagtacctgggc
tcacttcaatacaaagtgtgggagaagatgcaagggattgttaaatacacgccagtgact
ctggaccccaacacggctgccccctggctcctactgtctgaagacctcaccagtgtgagg
gacagcgatgacaaacggaagcttccagacaaccccgagaggtttgaccctgacacaggc
gtactgggctctgagggcttcagctcaggaaagcatgtctgggacgtggaggttggagag
aacagcgcctgggtcctcggtgtagccaaagagtccatccagaggaaagacaaggtctcc
tccgtgctgaagaatggatacctgtccgtgtacttttaccacaagatgtactttgccggg
acctcacccctgacacgactcaatctgaagaagagccctcagaggatcagagtgcagcta
gactgggagaaggggagagtgtgcttctctgacccagctgacaacacgcagatctacact
ttcaaacacaacttttctgagagggttttcccttatttctgggttggctgtaagcagtgt
ccgctgaggattgagccattagaggtctcagtgaaagctgtagatcacacctga
DBGET
integrated database retrieval system
