Oncorhynchus gorbuscha (pink salmon): 124014221
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Entry
124014221 CDS
T07892
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124014221
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
124014221
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
124014221
NCBI-ProteinID:
XP_046184964
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Position
LG25:complement(11492780..11500917)
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AA seq
941 aa
AA seq
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MVQLSPSPDRDVSPSPECSEKGRQGSPKIGSPGGLSPLQLALAASTTIYQGYESYIEDGL
ICLKHKIRNLEKKKIKLEDYRKRLQHGESLNQDQIDAVEKYDEVIHNLQFAQELHKTLGG
LTQELLKAQKKALRKEQMVKQEVERRRLCIVLQVKFLLQTLQQHEHIRKDLLSARNPQLK
VAELHSLLELAELLGVKRDNNVSLEDQMDRAALVYLDLLEGNNKAVAGTTYKVLKAKLAT
LMDCGYFDCVPPPPTKSPKEVEVPMTKKTVSETASLSTLMMSNKKDVPSREFLNRHYLPD
TDPNGCRDTPVTPSWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVLISKVPVAS
KKQNVEPKQRRVKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGS
FSFMQDSLLDGEGSSTNGHPRLGRHASGSPSPLVQRDPRRSPVDLLPKTLHSTPLLSKLL
PVDDKPSLTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPSLPAPPPLYRRE
SSISITLDEKTSARTPISESGKQSPCNGVVPPCTTTQGQPFSTPPSRRTLTMAPPVPFQT
MHSVFKVNAPLLPTVDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEQLQSVNQSECL
VGSGGQIFLSPGQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSSSGHRGGSFIPQA
HLYGARDIGYQHSYRRGGGNAGQRHNNSGWSDSSQVSSPDREGNYSLVDSAHGDSLQGVG
MDLTTQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGTLDQPIAFDQLHSNL
GEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHETA
SNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccatccccagaccgggatgtctctccttcacctgagtgctcagag
aaggggaggcaggggagccccaagattggctcccctggtgggctgagtcctctccagctg
gccctggcagcctccaccaccatctaccagggctacgagagttacatcgaggacggcctc
atctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaagactac
aggaagcgtttgcaacacggggaatcactcaatcaagaccagatagatgcagtggagaag
tatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggc
ctaacacaggaactgctaaaggcccagaagaaggcgttgaggaaggagcagatggtcaag
caggaggttgagaggagaaggctgtgcatagtgctgcaggttaagttcctcctgcagacc
ctgcagcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccagctcaag
gttgcagagctacatagcctgcttgagcttgctgaactactgggggtgaagagggacaac
aatgtgagtttggaggatcagatggacagagcagccctggtctacctggacctgctggag
gggaataataaagctgtagccggaaccacctacaaggtcctgaaggctaagttggcgacg
ctgatggattgtgggtactttgattgtgtaccgccgccaccgaccaagagtcccaaggaa
gtggaggtccccatgaccaagaagacggtgtctgaaacagccagcctctctaccctaatg
atgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgac
acagaccccaatgggtgtcgagacactcccgttactccgagctggaaggctgagttccag
gctatgaaggaacaggagccaccagactcgtgggatatggagtccgactccactcagcct
gtaatccagaaaccatggagaggggcggctgtgttaatctccaaagttccagttgcctcc
aagaaacaaaatgtcgaacccaaacagagaagagtgaagtccaaaagggagcgggacgcc
acagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttccttgccc
aaggaccccatcctgcgcaaacagcagctggaggacctgatgaccaagatccgaggctcc
ttcagcttcatgcaggattctcttctggatggagaaggatcatccactaacggccatcct
agactgggccggcatgcctctggatccccctctccactcgtacagagagatccgaggaga
agcccagtggaccttctccctaaaacactgcattccactccattgctttctaaactcctc
cctgttgatgacaaacccagtctgaccaatggagacgggggttgtctagagagctgtgac
ctggacctgacaacagaggacctggctcacgtcatagccattgatccatgtctgctgctg
tctgagagtgagactgcctgcccctctcttccagctcctcctcccctctaccgtagggag
tcctccatctccatcaccctggacgagaagacctctgctcggactcccatctctgaatcc
ggtaagcaatccccctgtaacggggtggtgcctccttgtaccaccacccaagggcagccc
ttttcaacccctcccagcagacgtacgctcaccatggcgccccctgttcccttccagacc
atgcattcggtcttcaaggtgaacgcccccttacttccgactgtagactttaaatccgat
attatcccctattcggactccaacggcctgtgctatgtcaccaccagcacccagacccca
ccggagtttgctccgtcggaggacgaacaactacagtcggtgaaccagtctgaatgtctg
gtaggtagtggtgggcagatcttcctgtcccctggccaatcgggtggcaccatgggccgt
tctgaccaatcatactacagaggatctgttagaggtattgcacgtggtggcaaggggctg
gcacactcctactttcgctcttctagtgggcacagaggaggaagcttcatcccccaggct
cacctgtatggagctcgggatattggctaccaacacagctacaggcgcggtggaggcaat
gcaggacaaaggcacaataatagtggttggagtgattcttcccaggtgagcagcccagac
cgggagggcaactactctctggtggactctgcccacggtgactcgctgcagggtgttggc
atggacctcaccacccaggtgacccctcatgccccccacaccctgatgcacgtacccatg
tacccactcccccagcatccccagcccctccgcgtggccttcacagcagcccgcacagcc
aactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaacctg
ggggagatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacctacgtc
ttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgc
aacgacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacggcc
agcaaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgc
ggatccatctatggcagcagctggaagtacagcacattctctggcttcctgctctaccag
gactga
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