Oncorhynchus gorbuscha (pink salmon): 124014229
Help
Entry
124014229 CDS
T07892
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124014229
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124014229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124014229
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124014229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
124014229
NCBI-ProteinID:
XP_046184985
LinkDB
All DBs
Position
LG25:complement(31864722..32155002)
Genome browser
AA seq
2255 aa
AA seq
DB search
MGLLTQLGLLLWKNFTLRKRQKVRLVVELLWPLFLFLILVRVRSTNQPIYQGGCHYPNNA
MPSSGLLPWLQGMMCNIGNPCVNHPTPGEAPGQVNNFNNSIIAGMLIELQSLLANRSILT
KFQRLSEDVDHWALIIQTSYPANGQPIPLRSILNDNEMFTAYLKKNLSMPLTVVNSLTNS
NIHRNEMMGISRQDDLRTTLCNGTTLDRYMEFTSASDKEAFQNVSCSLPAQQMRRAKEVF
LQNLNTSKILTNLPLDVNPAETFGLVGRTTEDAIHVIDEVNKLQNSMLFKSANTLDFRAD
ALGSLNMLLCGKAPDSNSRNTTMNFSASGLTRNYTENSELSDSRNRSSSAFCKILIDTIE
GTPGLHVVWSMFRPLIQGKVLYTPDTPATRLMVKEANSTFNALAMIKELANAWEDFGHLV
WDYFQNGRQVTTLRALLDNPVFVALLNQRLKGTRWTAELLANFLYNGPPEGRPTGMPPND
WRNAFNTTSQILDLLKKFIGCLNLDKFEAADSERHLMTRALELLESNRYWAGIVFEDLNP
AASHPPPYVKYKIRMDIDKGERTNKIKERGWSPGARSNSFNDLRYIWGGFAYLQDMMDHG
IIRAHTNKSQPLGVFAQQMPYPCYVDDVFLRSLARSLPLYMTLAWIYSVAMIVKGIVMEK
EARLKETVRMMGLRSSTYWLSWAVSSMLPLAVSALLLTLILKYGKVLQYSDPSVIFVFML
VFCVATIMECFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVLGFQVKITVSLLS
CVAFGYGCENFAKYEEQGIGIQWSNIAQNPEGDRYSFIVSIIMMLIDSLIYWLLTWYIEN
VFPGQYGIAKPWSFPFMASYWCGMSAVPNADPSQFKDPMEYNDYLEKPPPNMKAGVSIRN
LVKIYKTGKKLAVDGLSVDFYENHITSFLGHNGAGKTTTMSILTGLFAPTSGTALINGYD
IRTDMDTIRKHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRDEVKTEMDQMIKDVGLLH
KRKELAKNLSGGMQRKLSVAIAFVGGSNIVILDEPTAGVDPYARRGIWELLLKYKKGRTI
ILSTHHMDEADILGDRIAIISHGKMCCYGSSLFLKKYFGSGYYLTLVKAGNEQITNELSG
VKPGQENEVNGETDETLRRTSLDEGIASQNWSNSDPTELTAVSKLVRRHVPEAVFLESIG
QEITYILPYSGAKDGTFALLFKELDLEMADIGFTNYGISDTTLEEIFLKVAEDTGVDVEI
PDNKAPLVRDKTRSSRESKRQPQSLTNVGNTSDKVTGKTAEVKAKFTSRVEDVERVANVN
GKGSSVIMGWELIRRQFLALFIKRFHHARRSRKGIIAQVILPAVFVCLSLIFSVIIPPFA
EYPNLELQPWMYGLPQMTFYSNDGPPNNTEVAHVVDSLVNNPGFGTRCMANNPIPNLPCV
PIDSKWTTPSVEPSINNILINGTWSMANPSPNCQCSTPQKTIMLPDCPPGAGGLPPPQRI
QNTTDTLQDLTGRNMTDFLLKTYEKAGKKRYGGISVGGVNSQVRMTEPEIEAVIRDLKSL
FNSPQDKTTEQILLNAETLLKELGTRDNVKVWFYNQAWHGIVSFLNVANNAILRGNLPTG
HDPREYGISSSSHPLNLTKVQLSYQALAATSTDLVVSICVIFAMSFIPASFVLFLIQERV
NKAKHLQFVSGVNPAVYWVANFAWDICNYIVPCLIVIIIFLCFQQKAYVSPPNLPALVWL
LVMYGWSITPMMYPASFIFSVPSTAYVVLTCVNLFIGINGSLATFVMELFDDDKISHIND
IVKQVLLIFPHFCLGRGLIDMGKNQAMATLFERFGEDRFQDPLSWDMVGKNLCAMAIQGA
VMFTITLLIQYKFCYKPRLISGKSFSKEDEDVDVARERARVHEGGAENDLLRICDLSKVY
SGKNIPAVDRVCLGVPAAECFGLLGINGAGKTTTFKMLTGDIAVSGGEAFLNRYSVRTEM
RDVHQNMGYCPQFDALNDLLTGREHLELYARLRGVPEKEVTMVAEWGIQKLGLVKYSNKA
AGTYSGGNKRKLSTAMALIGCPPVVFLDEPTTGMDPKARRFLWNCILSVIKEERSVILTS
HSMEECEALCTRMAIMVNGQFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALGPVEEFVHE
TFPGSILKEKHHNTLQYQLPLSKGALVSIFSQFTTHQQRLGVEDYSVSQTTLDQVFVNFA
RYQHEEDNHATYENKVDVSGEMPMKTQHSPVPESA
NT seq
6768 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacaacttggtctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcgtctggtggtggagttgttgtggcctctcttcctgttcttaatcctcgtc
agggtgagatcaaccaatcaacccatttatcagggcggatgtcattatccaaataacgcc
atgccgtcctccggcttgctgccttggcttcaaggcatgatgtgtaacataggcaacccc
tgtgtaaaccatcccacgccaggagaagcaccaggacaagtcaacaacttcaacaattcc
ataattgctgggatgttgatcgagctgcagtcacttctggcaaacagatccatcctaacc
aagttccagaggctttcagaggatgtggaccattgggctttgattatacagacatcttac
cctgcaaacggtcagcccattcctctgagaagtatcctaaatgacaatgaaatgttcacc
gcatatctgaagaagaacttgtccatgccattgacagtagtcaacagtctgacgaactca
aatattcaccggaatgagatgatgggcatttcaaggcaggacgacctgagaaccaccctc
tgcaatggaacaacacttgatagatatatggaattcaccagcgcgtctgacaaggaggcc
tttcagaatgtcagctgctccctcccagcacaacagatgagacgagccaaggaagttttc
ctacaaaacctgaatacaagcaagatactcaccaacttacctttggatgtgaatccggca
gagacatttggattagtggggagaactacagaagatgcaatacatgtgattgatgaggtg
aacaagttgcagaactcaatgctgttcaagtccgctaacacgctggatttcagagcggat
gcgttaggtagtctgaacatgctactatgtggcaaagctccagactccaactccagaaat
accaccatgaatttctctgcctctggactgacgaggaattacacagaaaacagtgaatta
tctgattccaggaaccgcagttccagtgccttctgcaaaatattgattgatactattgag
ggaactcctggcctacatgttgtctggagtatgtttcggcccctaatccaagggaaggtc
ctctacacccctgacacacctgccactcgactaatggtcaaagaggcaaatagcacattc
aatgcattggccatgataaaagagctggcgaatgcttgggaggatttcggacatcttgtt
tgggactactttcaaaatggccgccaagtcactacactgcgggccctgctggataaccct
gtgtttgtagccttgctcaaccaacggctcaaaggcacaagatggacggcagaactgctc
gccaacttcctgtacaatgggccccccgagggtcgccccacgggcatgccgccgaatgac
tggcgcaacgcgttcaacaccacaagccaaatcctggatctcctgaagaagttcattggg
tgcttgaacctggataagtttgaggctgccgacagtgagagacatctcatgactagagcc
ttggagctactagagagcaataggtactgggctggtatcgttttcgaagacctcaaccct
gccgccagccacccccccccttacgttaagtacaagatccgcatggacattgataagggg
gagcgtacgaataagatcaaagaaaggggatggtctcctggggcccgtagcaactccttt
aacgacctgcgctatatatggggaggcttcgcctatctgcaggacatgatggaccatggc
ataatacgggcacacacaaacaaatcccagccgctcggcgtgtttgcccagcaaatgcca
tatccctgctatgtggatgatgtgttcctccgctcgctggcacgctctctgcccctgtac
atgaccctagcctggatctactcggtggcaatgatcgtgaagggcatcgtcatggagaag
gaggcgcgtctgaaggagacagtgaggatgatggggctgaggagctccacctactggctg
agctgggccgtgtccagcatgctgccgctggctgtcagtgctctcctcctcaccctcatc
ctcaagtatgggaaggtgctgcagtacagcgacccctctgtgatcttcgttttcatgctg
gtcttctgcgtggccaccatcatggagtgtttctttatcagcgtgttcttctccaaggcc
aacctggcggcggcatgcgggggcctcatctacttcgtcctctaccttccgcacctcctc
tgctatgcctggagggacgtcttggggttccaggtcaaaatcactgtgagtttgctgtcg
tgtgtggccttcgggtatggctgtgagaacttcgccaagtatgaggagcagggcatcggt
atccagtggagtaacattgcccaaaatcctgagggagatcggtacagtttcatcgtgtcc
atcatcatgatgctcatcgactccctcatctactggctgctcacgtggtacatcgagaac
gtcttcccaggccaatatggaatagccaagccgtggtccttccctttcatggcctcctat
tggtgcgggatgtctgcggtgcccaacgctgaccctagtcagttcaaggatcccatggaa
tacaatgattatttggaaaagccaccacccaatatgaaggcaggagtctcaatcaggaac
cttgtgaagatctataaaacgggaaaaaagcttgctgtggatggacttagtgtggacttc
tacgagaatcacatcacctctttccttggtcacaatggcgcaggaaaaacaaccactatg
tcgatcttgacgggactgttcgctccaacatcggggaccgctctcataaatggttacgat
atccgcacggacatggacaccattaggaagcatctgggaatgtgccctcagcacaacgtc
ttgttcaatgaccttacagtagaggagcacatctacttctatgccagattaaagggtcga
agccgtgatgaagtgaaaacggagatggaccaaatgatcaaggatgtagggctgctgcac
aaacgcaaggaacttgccaagaacctgtcagggggaatgcaaaggaaactgtcggtggcc
atcgcattcgtgggaggatccaacatcgtcatcctggatgaacccacagcaggggtggac
ccgtacgcccggagagggatatgggaacttctgttgaagtacaaaaagggtcgcacaatc
atcctctccactcatcacatggatgaggccgacatcttgggagaccgcattgccattatc
tctcacggcaagatgtgttgttacggctcctccctgttcctgaaaaaatactttggcagt
ggctactacctcactctggtcaaggccggaaatgagcaaattaccaatgagctcagcgga
gtcaagccgggacaggagaatgaggtaaatggagagacggatgagaccttgaggagaacc
agtctggatgaagggattgcaagccagaactggagcaactctgaccccacagagcttaca
gctgtcagtaagctggtgcgtcggcatgttcctgaggcagtgttcctggagagcatcggc
caggagatcacctacatcctgccttacagcggggccaaggatggcaccttcgccctcctc
ttcaaagagctggacctggagatggctgacattggcttcaccaactacggcatctcggat
accacactagaggagattttcctcaaagtggcagaggacacaggtgtggatgtggaaatt
ccagataacaaagcacctttggtaagagacaagacaagaagttcaagggaatccaagcgg
caaccgcaaagcctgaccaatgtagggaacacttcagacaaagtgactgggaaaacagct
gaagtgaaagccaagttcacaagcagagtggaggatgtggagagagttgccaatgtgaat
gggaagggctccagtgtgataatgggatgggaactaatccggagacaattcctggccctc
ttcatcaaacgtttccaccacgcacgcaggagccgcaaaggcatcattgctcaggtgatt
ctgccagctgtcttcgtctgcctgtctctcatcttttccgtcatcattcccccttttgct
gagtaccctaatctggagctgcagccatggatgtacgggctgccccagatgacattctac
agcaatgatggaccaccaaataatacagaggttgctcacgtggtggactctttggtgaac
aatcctgggtttgggactcgctgcatggctaacaaccctataccgaatctcccgtgtgtc
cccattgattctaaatggaccactccctcagtggaaccctctatcaacaacatcttaatc
aacgggacctggagcatggccaacccttcccctaactgccagtgcagcactcctcaaaag
actatcatgctgccagattgcccacctggagccggggggctgcctccccctcagaggatc
cagaatactacggacacactacaggacctgacagggaggaacatgacagacttcctcttg
aagacgtatgagaaagcaggcaaaaaaaggtacggagggatttccgttggaggagttaac
tcccaagtcaggatgactgaaccggaaattgaagctgtaatcagggatttgaaaagccta
ttcaattccccccaggataagacgactgagcagatccttctgaacgctgagacgctcctg
aaagagctggggaccagggataacgtcaaggtgtggttctacaaccaagcgtggcacggg
atcgtttcattcctcaacgtggccaacaacgccatcctgaggggcaacctgcctacgggc
catgaccccagggagtacggcatctcctcctccagccaccctctcaacctcaccaaggtg
cagctctcctaccaggcacttgctgccacctccaccgatttggtggtgtccatctgtgtc
atcttcgccatgtcctttatcccagcgagcttcgtcctcttcctcatccaggagcgtgtc
aacaaagccaagcacttgcagtttgtcagcggcgtcaacccggccgtctattgggtcgcc
aacttcgcctgggatatatgtaactacatagtcccgtgtctaatagtcatcatcatcttc
ctgtgcttccaacaaaaagcctatgtgtcccctcctaacctaccagctttggtttggcta
cttgtaatgtatgggtggtctatcacacccatgatgtacccagcctcgtttatcttcagt
gtccccagcacggcctacgtggtgctgacctgcgtcaacctcttcatcggcatcaatggc
agcttggccacctttgtcatggagctgttcgatgatgataaaatctcgcacatcaatgac
attgtgaagcaggtgctgctgattttcccgcacttctgtctgggtcgagggctcatcgac
atgggcaagaatcaggccatggccactttatttgaacgcttcggggaagaccgtttccag
gacccactcagctgggacatggtggggaagaacctgtgtgccatggccatccaaggggca
gtcatgttcaccatcactctccttatccagtataaattctgctacaaacccagactgatt
tctggaaagtcattctccaaggaggacgaagatgtggatgtcgctcgggaacgtgcacgc
gtccatgaaggcggtgccgagaatgacttgttgagaatctgcgatctctctaaggtgtac
tcagggaagaacattcctgctgtggacagggtgtgtttgggtgttccagccgctgaatgc
tttggactgctagggattaacggggcaggaaaaacaaccaccttcaagatgctgacgggg
gacatcgccgtctccggaggagaggccttcctaaacagatacagcgtacggacagagatg
agggacgttcaccagaacatgggctactgcccgcagtttgacgccctcaacgaccttctc
accggacgagagcatctggagttgtacgccagactacgaggcgtaccggagaaggaagtc
accatggtggcagagtggggcatccagaagcttggcctggtcaaatattccaacaaggca
gccggtacctacagcggagggaacaaacgcaagctctccactgccatggctctgattggt
tgtcctcctgtggtattcctggacgagccaacgacagggatggaccccaaagccagacgc
ttcctgtggaactgtatcctgagtgtcatcaaagaggaacgctcggtcatcctaacatca
cacagcatggaggagtgtgaggccctgtgcacacgcatggccatcatggtgaatggacag
ttcaagtgtctgggcagcatccagcatctcaagagcaggttcggggacggctacactgtg
atcgtgagggtgggcggctcgccccccgctctgggccccgtggaggagtttgtccacgag
acctttccgggtagcatactgaaggagaagcaccacaacactctgcagtaccagctcccc
ctcagcaagggcgctctggtcagcatcttcagccagttcaccactcatcagcagaggctg
ggtgtggaggactactctgtctcccagaccactttggatcaggtctttgtcaactttgcc
aggtaccaacatgaggaggacaaccatgctacttatgaaaacaaagtggacgtgtccggt
gaaatgcctatgaaaactcagcactcacctgtcccagagagcgcctga
DBGET
integrated database retrieval system
