Oncorhynchus gorbuscha (pink salmon): 124014269
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Entry
124014269 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124014269
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124014269
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
124014269
NCBI-ProteinID:
XP_046185035
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All DBs
Position
LG25:complement(16293403..16321528)
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AA seq
1781 aa
AA seq
DB search
MLILHIASLLSLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGEKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECQHNTMGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCDRCLPQHWGLSNDMDGCRPCDCDQGGALNNDCSPISGQCQCREHMYGRRCDQV
ESGYYFIALDHYTYEAEEAKHGPGVTVVPRPYPLNRSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPDQWEQVEIRVIRPYSMRVGQPASPCENTLQGGDQQLVSLLPG
SRHVLLLRPVCLEKGQNYTVRLGLPLYSSLSDVQSPYTLIDSLVLIPRVRELLLFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNNYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPLGCRRCECSPTGSVNTFCHEATGQCECVPGAS
GRQCVHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCRAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTADNYQLVCACSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDARTGVCLKCLHHTEGYGCQRCKLGYYGDATSQSCRR
CMCYSVGTMSEACPSPGECHCDLQTGQCPCRPNVIGQNCDRCALDTFNIGSGKGCQTCDC
DPTHSFGTSCNELSGQCSCKSGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGTFPACERCHQCFAEWDRVVGELSNQTQRLKDHVTE
LQTSGVXGPYKDTVSSLEISANAISAIVENNPAIQKMVDVQQMMQQATELVADLNERLNV
SEDSLSRLVVNANYTEASLDALRKQAQELERTVTDIQDHIKTVKNSNIEGAMDTITKAHL
ESKRAEIRVNQTTSYPDNTLEQSATVRREAEARLSQNQAEFDLRQQKHTERLERLATELN
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGILRCGGEGCDGLFTQTQSTLKTAK
DFDQEILSTLQEVDKLSRMVWEGKVRADEAKLNAQEVLLKSNQSRDRVEQSNEQLRSLIK
EIRGLLTNDRAKVEVIEAVSNEVLALEMPTSPEQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTAERLLEQARTASQEVSEMKETAALVKEALETTERAQNAAIDAVKQAHNNTRGTLD
LITSVESETAESELCLSNATLRLLQLERDVTLLRESSLGTSHHTQHTERLSETARQDAEQ
ALQEFDLEVKGKYNVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQSSVKLQRFRELER
SYAANQRTLEAKTVQLAGLEKTARQLLNDISQKVMVYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgctgatattgcacatcgcatcacttttgtccctcgggtggcgctcctttgcccagctg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcacaaactcaccgcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggagaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
ttcgcccctaaccgcctcaagacctggtggcagtctgagaatggggtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacttttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttggggagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatctgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccggcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactactatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaaatgcgcccct
gttgatgggatacacgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacaacaccatggggcgtcagtgtgaacagtgcagacccttctactac
cagcaccctgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtgacccg
acgggctccctgcagggtggtgtgtgtgacggcaggacagacgtgtccgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgtgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccctcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggatactacttcatcgccttggaccactacacctacgaggctgaggaagccaag
cacggccctggtgtgacggttgttcccaggccctatcctctgaaccgtagtcctacctgg
acaggggcagggtttgtcaaggtacctgagggagcccacctggagttccacatcaacaac
ttacctgactccatggactacgacatgctgattcgctacgaaccacagttgccggatcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtggggcaaccagcc
agtccatgtgaaaacacgcttcaaggaggagatcagcagttggtgtctcttcttccagga
tccagacatgtgctgctcctgaggcctgtgtgtctggagaaggggcagaactacactgtg
cgtctcggcctgcctctttactcctctctcagtgacgtccaaagcccctacacgctcatc
gactccttggtgttgattccacgggtgcgtgagctgctgttgtttgagggttctcagggt
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccaaagcgtcatc
aagagccccatgacggacatctgcaacaactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctcttagtgcagtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaatgtggcaggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagcccattaggatgcagacgctgtgagtgtagtcctacgggc
tctgtgaacactttctgccacgaggccacaggtcagtgtgagtgtgttccaggggcgtca
gggcgtcagtgtgtccactgcctgccaggctactggggcttccctcaatgccagccctgt
cagtgcaacggcaacagcgactactgccaccctcagaccggggagtgccagggctgccgc
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgaccccgtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgacgggccggggagcgggcgc
cagtacgcagacagctgctaccagaccgccgacaactaccagctggtctgtgcctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtaacgacaacatcgaccagctggacccg
gggtcctgcgacgctcgcacaggtgtctgcctcaaatgcctgcaccataccgagggctat
ggttgccagcgctgcaagctgggttactacggcgacgccaccagccagagctgcaggagg
tgtatgtgttattcagtgggcacaatgtcggaggcgtgtccgtctccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgcgac
cgctgtgcccttgatacgttcaacattggaagcggaaagggctgccagacctgtgactgt
gacccaacccactcctttgggacgtcgtgcaacgagctgtcagggcagtgctcgtgcaag
tcaggtttcgggggacgaaagtgcaacgagtgccgagataagttctggggagaccctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctgggcccaggtgtaaccagtgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgagtgg
gaccgcgtggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgnacggcccgtacaaagacaccgttagcagtctggagattagt
gctaatgctatcagtgcgatagtagagaacaaccccgctatacagaagatggtagatgta
caacagatgatgcagcaggccactgagctggtggcagacctgaacgagaggctgaacgtc
tctgaggattccctgtcccgtctcgttgtcaatgccaactacaccgaggccagtctggac
gcactgagaaagcaggcccaagagctagagagaacagtcacagacattcaagaccacata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccaaggcccacttg
gagtctaagagggcggagatccgtgtcaatcagaccaccagttaccccgacaacactttg
gagcagtcggctacagtacggcgtgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggctcgccacagagctcaac
actcttgacctatcagagctcagcaagcagacatgtggagcagctgggggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcggaggacggcatccttcgctgt
ggtggggaggggtgtgacggtttattcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctctccaccctgcaggaagtggacaagctctctaggatggtg
tgggagggcaaggtgcgtgcggacgaggccaagctgaatgctcaagaggtgctgctgaag
tccaaccagagtcgagatagagtggaacagagcaacgagcagctccgcagcctcatcaag
gagatacgaggcctactcactaacgaccgtgccaaggtggaggttattgaagcggtttca
aatgaggtgttggcactggagatgcccacatcgcccgagcagctggaggccctgaccaag
gagatcagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagagaggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggtgaaggaagctctggaaacgactgagcgtgct
cagaatgctgccatcgatgccgtcaaacaggcccacaacaacaccaggggaacacttgac
ctcatcacatctgtggagtcggagacggcggagtcggagctgtgtctgagtaacgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctgggcacc
agccaccacacacagcacactgagagactgtctgagaccgctaggcaggacgcagagcag
gccctgcaggagtttgacttggaggtgaagggtaaatacaatgttgtggagggcttggta
gtgacgaaggcagagggcgtgtctgacgccaggaagagggcggagctactgcagcaggag
gccaaggagctgctcacccagtccagtgtaaaactacagagattcagagagttggagagg
tcgtatgcggccaaccagcgtactctggaggccaagacagttcagctggccgggctggag
aaaacggcacgccagctgctcaatgacatcagccagaaagtaatggtctacagcacctgt
tcttag
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integrated database retrieval system
