Oncorhynchus gorbuscha (pink salmon): 124014445
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Entry
124014445 CDS
T07892
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124014445
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF1281_C
Motif
Other DBs
NCBI-GeneID:
124014445
NCBI-ProteinID:
XP_046185383
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All DBs
Position
LG25:31760409..31769792
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AA seq
724 aa
AA seq
DB search
MSGPTWPHPKTPGSPERLVPQMSDSGSAVYRQPPKKVSPDARPKYVVHDQNRGGGGMATR
YLATRSTAGPMQHHHQEDPGFHSKYIDHYYQPPPQGLKEDQSLNPQMDRYQLMHRGPPKK
LIGHHSSSDAEIDSLTCMLADLDSNPQNRAQNPDMSGPTWPHLKTPGSPERPVPQMSDSG
PAVYRQPPKKVSSDTRPKYVVHDQNRGGGMATRNLATRSTAGPMQHHHQEDPGFHSKSID
HYYQPPPQELEEDQSLNPHMDRYQLMHPGPPKKLIGHHSNSDAEIDSLTCMLADLDSHPQ
NSAQLYDNDHISGDRYKASAQPGASAQGRPSMGFPSHPQPQYRRTPPYPSDPHQSLQYFP
QPHDTDAQVSKRYPQPVPASYTTALTGPRFSVQVKTAQPVTASQTGRQAEHAYTPPSPRQ
HALRSPPKNQTGPQGWYPPHPASQVQELHSERGYKESVAGSGGRVIQWPMSNRGPEIHQS
GSGSAPSSAYQPSKQGTAALRPEEELVQLTKKFVYDMNHPLTEEDFGRCARCGNNVLGDG
SGCIAMEQVFHLECITCITCHTRLQGKTFYALDKQSYCESCYISILERCFMCSKPILDRV
LRSMGKAYHARCFNCVACGCSLDGVPFTVDATSQIHCMADFYRKFSPRCSVCRHVIVPEL
GQNAAVSIVALGRSFHVNCYGCEECGLLLSSEGEERVCYLLDGHILCQGCSARHIQIPSP
KNLH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcctacctggccgcatccgaagactccgggtagcccggagagactcgtcccc
cagatgtccgactctggatcagccgtgtacagacagccgcccaagaaggtctccccggac
gcccggcccaagtatgtggtccacgaccagaacagaggaggaggcggaatggccactagg
tacttggctacaagatccacagctgggcccatgcagcaccaccaccaagaggacccaggg
tttcactctaaatatattgaccactactaccaaccacctccccaagggctcaaagaagac
caatcattgaaccctcaaatggaccgctaccagctgatgcaccggggacctcctaagaag
ttgattggacaccactccagcagtgatgcagagattgactcgctcacatgcatgctggcc
gatctggacagcaatccacaaaacagagcacagaaccctgacatgtctggtcctacctgg
ccgcatctgaagactccgggtagcccggagagacccgtccctcagatgtccgactctgga
ccagccgtgtacagacagccgcccaagaaggtctcctcggacacccggcccaagtatgtg
gtccatgaccagaacagaggaggaggaatggccactaggaacttggctacaagatccaca
gctgggcccatgcagcaccaccaccaagaggacccagggtttcactctaaatctattgac
cactactaccaaccacctccccaagagcttgaagaagaccaatcattgaaccctcacatg
gaccgctaccagctgatgcacccgggacctcctaagaagctgattggacaccactccaac
agtgatgcagagattgactcgctcacatgcatgctggccgatctggacagccatccacaa
aacagtgcacagctttatgacaacgaccacatctcaggggatcgctacaaagcctcagcc
cagccaggagcatccgctcagggcaggccatccatgggtttcccctctcacccccaaccc
cagtaccgtcgtacacccccataccccagtgatccccaccagagtctccagtacttcccc
cagccacacgacaccgatgcccaggtctccaaacggtacccccagcctgtccccgcctcc
tacactaccgcccttactggcccgaggttcagtgtccaggtcaaaacagcccagcctgtc
accgcctcccagactggtaggcaagccgagcatgcttacacccctccctcaccccgccag
cacgcgttgcggtccccacccaagaatcagactggcccccagggctggtaccctccccac
cctgcatcccaagtccaggagctgcactctgagaggggttacaaggagagtgtcgcgggg
tctggagggagagtcatccagtggcctatgtccaatagaggcccagagattcatcaatcg
gggtcaggctctgcaccaagctccgcctatcagcccagtaagcaggggacagcagctctg
agaccagaggaggagttggtccagctcactaagaagtttgtctatgacatgaatcatccc
cttacagaggaagactttggtcgctgtgcacgttgcggcaacaacgtccttggcgacggt
agcggctgtatcgccatggagcaggtgttccacctggagtgtataacttgcatcacctgc
cacactcgtctccaggggaaaacgttctacgccctggacaagcagagctactgcgagagc
tgttatattagtatcctagagcgctgctttatgtgctccaagcccatcctggaccgtgtc
ctgcgttccatgggcaaggcctaccatgcgcgctgcttcaactgcgtggcgtgtggctgc
tccctggatggtgtgcccttcacagtggacgccacctcccagatccactgcatggcagac
ttctacaggaagttttcccctcgctgctcagtgtgtcgccatgtcatcgtgcctgagctt
ggccagaatgcggcggtcagtatagtggcgctgggccgcagcttccacgtcaactgctat
ggatgtgaggagtgtggtctgctcctgtcctctgagggtgaggagcgagtctgttacctc
ctggatggtcacatcctatgtcagggctgcagcgcccggcacatccagatcccctcaccc
aaaaatctccactga
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