Oncorhynchus gorbuscha (pink salmon): 124014448
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Entry
124014448 CDS
T07892
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124014448 (fbxo18)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124014448 (fbxo18)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124014448 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
F-box-like
F-box
AAA_19
Viral_helicase1
AAA_30
PhoH
AAA_11
ResIII
AAA_22
rve_3
RFC1
Motif
Other DBs
NCBI-GeneID:
124014448
NCBI-ProteinID:
XP_046185390
LinkDB
All DBs
Position
LG25:complement(10060149..10086274)
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AA seq
1031 aa
AA seq
DB search
MMESSTKGKAKRRHLNSEECREISRRPEGSQPLTQPHSVTRRHSNSDPNRGLYPRTPTKR
KRDARDDKKQQGITKFFPVISVVKVLSPQKAALSQGSGSIKTEGLNGELIPKNETIEEKA
LATSMKEEPEDEKVDYLEGLTTDMFGDDKEFERCWSDSDPDPALMNHHEEEEVEALPDAL
YGLLGSSRGLAHPQGHVDDLPEEVLMLVLSLLPAEDLYCNVSLVCQRWRNIVTQSLFVPW
KKLYYRYSKKEIDAVKEINAILETHRIIKDDQESILHIVEFMAQYKPSQKVKPESVLQSV
RTHCLFPQAEACIKHRLPKLEGIEGGPNPWAAMALMLVLCDGVGDVLDLVVCLRGCLPSA
SAITEYLSAMATMLLAMRRNDINISNRWHYNIFYVLHLMENALPTAITNQSGRAQVQVTH
EQQQILNHDIHRDHVVKIMAFAGTGKTTTLIRYAQQRPHHHFLYMAFNKSVASQAQRCFP
SNVDCRTVHSMAFGAVGKRYQELKKLSSNVKPFSVAWVLPKGSGGFVNAKVVTLTLNAYM
ASADTHITPNHVPNTYKNTHGKMTVPDCNAKRMFARDAQRIWDKMVALEETREYAHHMTH
DGYLKLWQLQRPTLDKYDVIFIDEAQDCTPAIMDIMLPQHCGKILVGDPHQQIYTFRGAV
NALNLVEHTHLYYLTQSFRFGSEIAYIGATILQVCKKVKKILVGGKQDGCVWGKAVDSLR
PLTTGLSPGRGKLAVLSRSNVSVFDQAVRLTDANPRCRLHIVGGVENFGLKRIMDIWVLM
QPENNRSRGIKDSFIRKFTQQSLGGYFGLKSYAKKTEDRELEGKLSMVEKYNSRIPELVE
RLYGCTEREAQHADFILGTVHKSKGLEFDTVVITDDFAKVPCAAHNLPRLSSCSGGDVPD
DEWNLLYVAVTRAKSSLVITKNITNILTLAGEYFLRTELTSTLLTEGQPPCCSVRECHNH
IMPVWPLAMCKLPLQYMDSADDGGPMCGACVLQRVGPTASLLASPELLKVLPVTEERLNL
PINYALLMALF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcgtccactaaaggaaaagccaagcgaaggcaccttaactcagaggagtgt
cgtgaaattagtaggagacctgagggcagccaacccctcacacagccccactccgtcact
cgtaggcacagcaactcagaccccaaccggggtttgtaccccagaacacccacaaagaga
aagagagatgcacgtgatgacaagaagcagcaagggatcactaagtttttccctgtgatc
agtgtggtcaaggtgttaagtcctcagaaagcagccctgtcccagggctcaggttccata
aagacagagggactcaatggagagctcatccccaaaaatgagactattgaggagaaggca
ctagccacctctatgaaggaggaacctgaggatgagaaggtggactatctggaggggctg
acaacagacatgtttggggacgacaaggagtttgaacgctgttggtcagattcagatcca
gacccagccttaatgaatcatcatgaggaggaggaggtggaggccctgcctgacgccctc
tacggcctcttgggaagcagcaggggcctggcccatccccagggtcacgtggacgacctc
ccagaggaggtgctgatgctggtgttgagcctcctgcctgctgaggacctctactgtaac
gtcagcctggtctgccaacgctggaggaacattgtgacccagtcactgtttgtgccctgg
aagaagctgtattaccgctactcgaagaaggagatcgacgccgtgaaggagatcaacgcc
atcctggaaacccatagaatcataaaggacgaccaggagagcatcctccatatagtcgag
ttcatggcccagtataagcccagtcagaaggtgaagcctgagtcagtgttacagagtgtg
aggacacattgtctgttccctcaggctgaggcctgcattaaacaccgactccccaaattg
gagggtatcgaggggggccctaacccgtgggcagccatggctctgatgctggtgctgtgt
gacggtgtgggagatgttctggacctggtggtctgtctcagaggctgtctcccttcagcc
agtgccatcacggagtacctcagcgccatggcaaccatgctgctcgccatgaggaggaac
gacatcaacatcagcaacaggtggcactacaacatcttctatgtccttcacctgatggag
aatgccttgcccacagcaataaccaatcagagtgggagagcccaggttcaggtgacccac
gaacagcagcagatcctcaaccacgacatccatagagaccacgtggtcaagatcatggcc
ttcgcaggcacagggaagaccaccaccctgattcggtacgcccagcagaggccacaccac
cacttcctctacatggccttcaacaagtctgtggcttcccaggcccagcgctgtttcccc
agcaacgtggactgcaggacggtccactccatggcctttggggccgtcggaaagaggtac
caggagctaaagaagttgtctagtaacgtgaagcccttctctgtggcctgggtgctgcct
aagggcagcgggggctttgtcaacgccaaggtggtcaccctgaccctcaatgcctacatg
gcctcggccgacacacacatcacccccaaccacgtcccaaacacgtacaaaaacacacat
ggcaaaatgaccgtgcctgactgcaatgcaaaaaggatgtttgcgagggatgcccagagg
atctgggacaaaatggttgccttagaagagaccagggagtacgcacaccacatgacccac
gatgggtatctgaagctgtggcagctgcagaggccaactctggacaagtatgatgtcatc
tttatagacgaggcacaggactgtactccagccatcatggacatcatgctacctcagcac
tgtgggaagatcctggtgggagaccctcatcagcagatctataccttcagaggagcagtc
aatgccctgaacctggtggaacacacacacctctactacctcacccagagctttcggttt
ggttcggagattgcctacattggagccacgattctccaagtgtgtaagaaagtgaagaag
attctggttggaggaaaacaagacggctgtgtgtggggtaaggctgtggactcactgcgt
cccctgactacaggtttgagtcctggccggggtaagttagcagtgctgtctcgctctaac
gtctctgtgttcgaccaagcagtcagactcaccgatgccaacccccgctgtaggctgcac
atcgtagggggggtggagaattttggcctgaaaagaatcatggacatttgggttctgatg
cagccagaaaacaaccgctctcgaggcatcaaggacagcttcatccgtaagttcacccag
cagagtctggggggctactttggactgaagagttacgctaaaaaaacagaggaccgtgag
ttggagggcaaactctccatggtggagaaatacaacagccgcatccctgagctggtggaa
cgcctctacggctgcacagagagagaggcccaacacgcagattttatcctggggacagtc
cataagtcaaagggtctggagtttgacacggtggtgatcaccgatgactttgctaaggtc
ccctgtgccgcccacaacttacctagactttccagctgctcaggaggtgacgtcccagac
gatgagtggaacctgctgtatgtggcggtgactcgggccaagagctctctggtcatcacc
aagaacatcaccaacatcctcacactggctggggagtacttcctgaggacagagttgacc
agcaccctgctgaccgagggacagcccccatgctgctccgtgcgggagtgtcataaccac
atcatgcccgtctggcccctcgccatgtgcaagctgccactccaatacatggatagtgca
gacgatggaggtcctatgtgtggggcgtgtgtgttgcagcgtgtcggccccacggccagt
ctcctagcctccccagaactgctcaaggtcctgccagtgaccgaggagcgtctgaacctg
cccatcaactacgctttgctgatggctctcttctga
DBGET
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