Oncorhynchus gorbuscha (pink salmon): 124014543
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Entry
124014543 CDS
T07892
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124014543
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124014543
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GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
124014543
NCBI-ProteinID:
XP_046185616
LinkDB
All DBs
Position
LG25:complement(36053048..36110228)
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AA seq
1945 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSAQQANLNHGSLKSPEIFLCYKRGHDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSVSNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WTPNTRYPLPVFSTFVLTNSSGEKVYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPMPLSGADYSTLLINLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKNLPKKPCKSLFNSLTNLQHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMAHILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLKSRERAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVDGESSEDTKLMELDESQRSEHTVFVMPPEPPTTEDESDPPTRYSYKSFPRLRMDLFD
RPKEVIPALRSSTSGASLSSSPALLAKRTKQEIKLAYKMAKRFYSDPPLWAKCLFSHCYS
LWFICLPVGVRLVQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGLYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVVRTVAQFKQALHR
MPATKGPTIITTVVSVSGDLLSHGSADHSSEVNGEDHTLFARSLIIGDATDNHCSTGGQS
DQGYGSKDELHQVQVDLAPSAAPLVDVDHRSKPKAQHNGGDIAGSVDSSVVVAEPTSPVE
AIPHVPSIVKLSTGGSFDTAMKRGETAPGKLFSLRSQSENVSLPEEGESTAPGGSGETGP
AVQGQGQRQKAFSERSCSFSVESRAGMLMEKNGVDHIARRMGADARILADALSGCGTTQP
PTNPPSKALFKELESEEGRCPMLGKLSEEEGPVMDPTPLEEGLGKEEERMDGEDEMGLKL
EEEGDSGVRGDSSLPTLEMKEVDVGADPLSLLVSEHEELASVTSQELPHSLPAVVSRNLA
DEIEMYMSLRSPLGPKSSSMEFQQGGQGGDTSPDTAPVKQALERRSSLPVPPVKHPGGSS
GDSTPKRSPAAVTRSKTFAVMATRSRGVVASQRSSLTALVRSSQNGSLGSVINSISGMKM
DTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSDDEDELAPGYRDRDSFPAGLDES
MLSGGGGGDSPTHRGPTQGLVSNGLTQSSTSLASSSSSSDTGRGPHSTLTPGRPGRGPDS
DQGSHHTSSSSIYQNCALEVLMSSCSLCRSCECLVYDEEIMAGWTADDSNLNTTCPFCRA
AFLPLLHVEFHDLRTNTAFYLKPSASGDSIHSASHQPTTTDSTVLGVGGAADTPRPDLIS
FPESSSEDPGEAPASQTATHKSLVPVAEPAQSDPLGLLEHQAGKRGTSLTRSNSVGGPLQ
SLVSYQRQPGHGVSTTSLPCSLTEVDGLGQKRPNPMPVSVPYLSPLVLRKELETLLENEG
DQVIYTHKFLSQHPIIFWNLVFYFCRLDLPSYLPGLILTSEHCNNGVQLPQTSLSQDSKQ
VYVQLLWDNINLHQEPGDPLYQSWRTLLEKKATLAPTDHQETRTFLNSIVRSIQTNDVYG
PINLLLREVKRHPEVKRQRGIYREILFLALVALGRENIDVEAFDREYRQAFDGLSTEQLK
ALHKIDRPPNSNVQWCLKCFGAPVI
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgccactggagcaggacctgtcggagaccaagtccagcgggcccaaggcaccc
atcactgacctggctgtcatcaacaagtcagcgggcgagacggtgccggagggcttcacc
tgcatcgagagcacctacagcgcgcagcaggccaacctcaaccatggcagccttaagagc
cccgagatatttctctgctacaagaggggccacgacaagcccccactcattgacatcggg
gtgttatatgaaggtaaggagcgtctcatccagggctgtgaggtaatccaggccacgccg
tatggccgctgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttacgccgcgcgccacccgtccagccccagaactccctgtccgtcactgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccacacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctctagtgttttcctgtgctacaagaaatccgtgtcggtgtcc
aactccattaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtcggagtctgtgcccctgttctgcctccccatgggggctaagatcgaatgc
tggacccccaacacacgctaccctctccctgtcttctccacctttgtgttaaccaactcc
tctggggaaaaggtgtacggtgctgccatccagttctatgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagttgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctcctttcccgctggcccttcttc
gagtcgttccgcaaattcctcatgttcctctacaagctgtccgtctcgggcccccacccg
ctgcccatcgaaaagcacatctcccatttcatgcacaacgtgtccttcccctcacctcag
aggcccagaatcttggtccagctctctgcacacgacaccttgatgctcgcacagcctgtg
tgtactcctatgcctctcagtggtgcagactacagtacactgctgattaacctgggctca
gagaactgtgccacgctgttgcactttgtcctgctggagagtaagatcctgctgcactcc
ttgagacccgctgtactcaccggggtcgcagaggctgtggtggcgatgatttttccattc
cagtggcagtgcccgtacatccccctctgcccactctccctggcgggggtcctcaatgca
ccttgtcccttcattgtgggcgtggactcccgctactttgacctctatgaccctcctccg
gacgtggtctgtgtggacctggacaccaacacgatctacctgtctgatgagaagaaacac
agcaactggaagaacctcccaaagaagccctgcaaaagtctgtttaactccctgaccaac
ctgcaacaccagctgggcatcgtgcgtcggacggcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggcccacatcctgaagggctaccgttcctatctcaaa
cccatcacccaggccccctccgagaaggccacctctgcagactcactatatgacctacag
ggtttcctaaagagcagggagcgagcccaccagaagttctattcgcagctgaccaagact
cagatctttatacgcttcatcgaggagtgcacattcgtcagcgacaaggatacaggcctt
gccttcttcgacgactgcattgagaagctatttccctctgataaaggcaacgacaaaggc
actaaggtggacggtgagtcctcggaggacactaagctcatggaactagacgaatcacag
aggagtgagcatacagtcttcgtcatgcccccagaacctcccaccaccgaggacgaatct
gatccccctacccgctacagttataagagtttccctcggttgcgtatggacctgtttgac
cgtcccaaagaggtgataccagcgctgaggagcagtacatcaggggccagcctgtccagc
agccctgcactgctggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccgaccctccgctgtgggccaagtgtctgttcagccactgctacagt
ctgtggttcatctgtctgcccgtgggggtgaggctggtccagtcaaagagctgggccatg
cagcaggcctacaacgtcctgctcaagatgaggacgtctgaggtggaggtcctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtttgtacggtcagccggtcatggctgtc
cgtgttctggtggagatgaagaaggctggggtgcaccctaacgcgattacctatggctac
tacaacaaggctgttctggaaggcccctggccaagtcggaaccgcagcggtctcttcatg
tgggccaaggttcgcaacgtggtgcgcactgtggcccaatttaaacaggcactccaccgg
atgcccgccacgaaaggacccaccatcatcacgacagtggtgtcggtgagcggcgacctg
ctgagccacgggagtgcagaccactccagtgaggtgaacggagaggatcacacgctgttc
gcacgcagcctcatcataggagacgccacggacaaccactgcagcacaggaggtcagtct
gaccagggctacggctctaaagatgagctgcatcaggtgcaagtggatttggctccatca
gcagcccctcttgtcgatgtggatcaccgcagcaagcccaaagcacagcacaatggtggg
gacatagctggctcggtggacagttctgtggtcgtagcggagcccaccagccctgttgaa
gccatcccacatgtccccagcatcgtcaagctgtccacaggagggagcttcgatactgcc
atgaagagaggagaaactgccccagggaagctgttctctctgcgcagccagagcgagaat
gtgtctctgccggaggagggtgagtctacagccccgggtggctctggggagacggggcct
gcagttcaggggcagggccagcgccagaaggccttctcggagcgcagctgcagcttcagc
gtcgagagtcgtgccggcatgctgatggagaaaaatggtgtggatcacatcgcgagacgc
atgggtgccgatgcccgaatcctcgccgatgccctttctgggtgtggcaccacccaacca
cctacaaatccaccatccaaggccctttttaaggagttggagtcagaggaggggcgttgt
ccgatgctggggaaactgtcagaggaggagggtcctgtaatggacccaaccccattggag
gaggggctagggaaagaggaggagagaatggacggggaggatgagatgggactgaagttg
gaagaggaaggagattcaggggtaaggggtgatagctctctgccaaccctggagatgaag
gaggtggatgtgggggctgatcccctctccctgctggtctcagagcacgaagagttggcc
tccgtaaccagccaggagctcccgcactccctgcccgccgtggtgtcccgaaacctggca
gacgagattgagatgtacatgagcctgcgaagcccactgggccccaagtcctccagtatg
gagttccagcaaggggggcagggaggggacacttccccggacactgccccagttaaacaa
gctctagaacggaggtccagcctccctgtgccccctgtcaaacacccagggggttcaagc
ggggactcgacgcccaaacgcagccctgctgctgtcacgcgctcaaagaccttcgccgtt
atggccacaaggagccgcggtgttgtggccagccagaggtcgtcactgactgcgctggtg
aggtcatcgcaaaatggctcgctgggctcggtcatcaactccatctcaggcatgaagatg
gacaccctgctctctggtcccaagatggacgtgttgaagtcaggcatgaagcaggcaggg
aacctggccagcaaagtgtggggggctgtggcttcagcctattcctactccgatgacgag
gatgagctggccccgggctacagggatagggatagtttccctgccgggctggatgagtcc
atgctgtcagggggtggaggaggggacagtcccacccacagagggccaacccaaggcctg
gtgtccaacggactgacacagagcagcaccagcctggccagcagcagtagcagcagtgac
acagggagaggacctcactccacactgactccaggacggccagggagaggtccagactct
gatcaaggctcccaccacaccagctcctcaagtatctaccaaaactgtgccctagaggtg
ctgatgtccagctgctccctgtgtcggtcctgtgagtgtctggtgtacgacgaggagatc
atggcgggctggacggcagacgactccaacctcaacaccacctgtcctttctgccgcgcc
gcctttctgcctctgctccacgtcgagttccacgacctgcgcaccaacacagcgttctac
ctgaagcccagtgcatcaggagacagtattcacagcgccagccaccagcccacaactaca
gattccaccgtgctcggggtcgggggtgcagccgacaccccgcgcccagacctcatcagc
ttcccagaatcctcctctgaggacccaggggaggctccagccagccaaaccgccactcac
aagagtttggtaccggtagcggagccggctcagtcggaccctctgggcttgctggaacac
caggcagggaagcgggggacttctctgacgcgcagtaacagtgtgggcgggccactacag
agcctggtctcttaccaaagacaacccggacacggcgtgtccaccaccagcctgccctgc
agcctgacagaggtggatggcctgggacaaaagcggcccaaccccatgccagtgtctgtg
ccctacctcagccccctggtcctccgcaaagaactggagaccctactcgagaacgagggg
gaccaggtgatctacacccataaattcctgagtcaacaccccatcatcttctggaacctg
gtgttttatttctgtcgtctggacctgcccagctacctgcccggcctcatcctcacctca
gaacactgcaacaatggagtacagctcccccagacctccctgtcccaggacagtaaacag
gtgtatgtacagctgctgtgggacaacatcaacctgcaccaggagcctggcgatcccctc
taccagagctggaggaccctgctggagaagaaggccaccctggcccccacggaccatcag
gagacacggaccttcctcaacagcatcgtccgcagcatccagacgaacgacgtatacggc
cccatcaatctgctcctccgagaggtcaagcggcacccagaggtcaaacgccaaaggggt
atctatagggagatcctcttcctggcgcttgtggcattgggacgggagaacattgacgtc
gaggcctttgaccgtgaataccgccaggcctttgatggtctgagcacagagcagctcaag
gctctgcacaagattgaccggccacccaacagcaatgtccagtggtgcctcaagtgcttt
ggagctccagtcatctga
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