KEGG   Oncorhynchus gorbuscha (pink salmon): 124014567
Entry
124014567         CDS       T07892                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124014567 (per1b)
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    124014567 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 124014567
NCBI-ProteinID: XP_046185676
LinkDB
Position
LG25:44040330..44058421
AA seq 1364 aa
MSYDDSNSTPGDDTWGRVGSTIEEEEEAGTGLNSPGSNNNHGSQSGTSDLANRVRGSSPS
GSGSGGSSGGDQRGPSSDDGERESSEGGGGSRGHQSRSSHCSSSQKDSGMMLENTESNKS
SQSQSQSPPSSSLAYSLLSVSSEQDPPSTSGCSSNEQHQTARVQTQKEMLKALKELKVRL
PAECKGKGRSSTLDALQYALNCVKQVRANQEYYHQWGVEECHGCSLDLSVYTTEELDNIA
SEYTLKNTDTFSMAVSFLTGKVVYISPQGSSLLRCKPERLQGAIFSELLAPQDVSTFYSS
TAPCHLPAWATCMGSVSPLTDCTQGKSMFCRISADRAQGGEIKYYPFRMTPYQLTLRDLD
TADPQPCCLLIAERVQSGYEAPRIPADKRIFSTSHTPSCLFQEVDERAVPLLGYLPQDLV
GSPVLLYLHPEDRPIMVAIHRKILQSAGQPFDSSPMRMCARSGEYVTIDTSWSSFINPWS
RKVAFIVGRHKVRTSPLNEDVFTPLRGCEGRPVAPEIVQLSEQIHRLLVKPVHSGGSQGY
SSLASNGSCSHEQQYRRTASSASDSKSTNAMEAMEAAVVALHKPMTFQQICKDVYMVKTS
GQQVFINSHNRALSRRHAVTALRATGEVEPIKSLIPEVACPSKPLVFNTQQLMKEEPPSA
YSYQQINCLDSIIRFLDGCNVKRKFGSSSATSASDEEKQQETAGNEKGGPATSVTLVGDS
AGVPPLAMHSHKARSVASVTSQCSFSSTIVHVGDKKPPESDVVMENAPPTPTPATPTTTR
SPPTAIINPPPPKTTSPSSRRGGGLTKEVLSAHTQQEEQAFLCRFSDLSQLRVISPSSAL
RCPLPNTNPRRRRACSPDYPAAEGSSGRRGAKRLKKQESSEQRGPLALGLTGPLRSPNVV
PMNSPPSSTYTIPVMPLGPPTTSSWPVSVGSQASLPSVPYPSGTLPLYPIYPPLSQPIQN
QMVPPMMALVLPNYMFPQLHPNLSQMTTAMNTMGSLTPQPGAAMVTPGPQQFFNPGAGFP
FPGTNVMPCPMPTMPSLMQTAMPIQTQRPASGSSTPQSYSQVPVDQDCAESPLFHSRCSS
PLNLLQLVEESPSNRLEVATALAASAQQATIPSQGTRGRSPDDSKENANDSNQDGESTPS
DLLDLLLQEDSRSGSASSGSGSDSLGTVSNGCSSSGSGTSRSRSSRTSKYFGSIDSSEND
HCRKQPAGGSRAGGDGEEQLIKCVLQDPIWLLMANTDHKVMMTYQLPTKDRETVLRQDRE
ALRAMHKHQPRFTEDQKRELSQVHPWIRTGRLPRAINISACMGCKSSPLPESTVDQGGEA
RREEGHAAHSETQGNDQEMTTEEQEVTWPTGEKKARAGETYMTH
NT seq 4095 nt   +upstreamnt  +downstreamnt
atgagttacgacgactcaaactccacccctggcgatgacacttgggggcgagtgggaagc
accattgaagaagaggaggaggcgggaacaggattgaactcccccggcagcaacaacaac
cacggcagccaatcgggaacttcggacttggccaatcgggtgcgaggatcctctccaagt
ggatccggctccggtggctcgtctgggggggaccagaggggtcctagctcagatgacggg
gaaagggagtcgagtgagggagggggcgggtccaggggacaccaatccagaagttcccac
tgttcctccagccagaaagactcgggcatgatgctggagaacacagagagcaacaagagc
tctcagtcccagagccagtctccccctagcagctctctggcctacagcctgctgtcagtc
agctcagagcaggaccctccttccacctccggctgcagcagcaacgagcagcaccagacg
gcccgcgtccagacccagaaggagatgctgaaagccctgaaggagctcaaggttcgcctg
ccggccgagtgcaagggcaaaggtcgctccagcaccctggacgccctccagtacgccctg
aactgtgtgaagcaggtgcgagccaaccaggagtactaccaccagtggggcgtggaggag
tgtcacggctgcagcctggatctgtctgtatataccacagaggagctggacaacattgcc
tcagagtacaccctcaaaaatacagacaccttttccatggcggtgtccttcctgacaggc
aaagtggtgtacatctccccccagggctcatccctgctgcgctgcaagccagagaggctc
cagggggccatcttctccgaactgctggctccccaagacgtcagcaccttctacagcagc
accgccccctgccacctgcccgcctgggccacctgcatgggctctgtgtccccactgaca
gactgcacccaggggaagtcgatgttctgtcgcatcagtgccgaccgggcgcagggaggc
gagatcaaatactaccccttccgcatgaccccctatcagctaaccctgagggacttggac
acggcagacccccagccctgctgtctgctcatcgctgagcgggtacagtccggatacgaa
gctcccaggatccctgctgacaagcggatcttttccaccagtcacactcccagctgtctc
ttccaggaagtagatgaaagggctgtgccgttgttgggctaccttccccaggacctggtg
ggaagccctgtacttctctacctccacccagaggacagaccgatcatggtggccatacat
aggaagatcctccagtctgcaggccagccctttgacagttctcccatgaggatgtgtgcc
cgcagtggggagtacgtgaccatcgacactagctggtcctccttcatcaacccctggagc
aggaaggtggccttcatcgtgggccgccacaaagtccgaaccagccccttgaacgaggac
gtgttcacccctctgcggggctgtgagggccgccccgtggccccagagatcgtgcagctg
agcgagcagatccaccgtctcctggtgaagcctgtccacagtggagggtcgcagggctac
agcagcctggcctcaaatggatcctgctcccacgagcagcagtaccgacgcacggcctcc
tccgcctccgacagcaagtccaccaacgccatggaggccatggaggcagccgtggtcgcg
ctgcacaaaccgatgacgttccagcagatctgtaaggacgtgtacatggtcaagaccagc
gggcagcaggtctttatcaactctcacaaccgagccctgtcccggcgacacgctgtcaca
gcgctccgggccactggagaagtggagcccatcaagagtctgatcccggaggtggcgtgt
ccatccaaacccctggtgtttaacacccagcagctgatgaaggaggagccccccagtgcc
tacagctaccaacagattaactgtctggacagcatcattaggttcttggacggctgtaac
gttaagaggaagtttggctcgtcctctgccacgtccgcatcggacgaagagaaacaacag
gaaaccgctgggaatgaaaaaggtggtccagctacctcagtcaccctggttggggactca
gcgggggtaccccccctggccatgcacagccacaaggcgaggagtgtagcctcagtcacc
tctcagtgcagcttcagcagtaccatcgtccacgtgggagacaagaagccccccgagtca
gacgttgtcatggaaaatgctcctcccactcctacgccagccactcccaccacgaccagg
tctccacccaccgccatcattaaccctccaccgcccaaaacaacctctccatccagccgg
agaggaggtggcctgaccaaggaggtgctctctgctcacacgcagcaggaggagcaagcc
ttcctctgtcgtttcagtgacctgagccagctgagggtgatttctccatcctctgctctg
cgttgcccgctccccaacaccaacccccgccgcagaagagcgtgttcccctgactaccct
gcagctgaaggcagcagtggtcgccgtggagccaagaggctgaagaagcaggagtcctca
gaacagaggggccctctggctttaggcctgactggacccctccggagccccaacgtcgtc
cccatgaattccccccccagctccacctacaccatcccagtgatgcccctggggcctccc
accacatcctcctggcccgtctctgtaggatcccaggccagcctgccctctgtgccctac
ccctcgggtacgctccccctgtaccccatctaccctcctctctcccagcccatacagaac
cagatggtgcctcctatgatggccctggtgctgcccaactacatgttcccacaacttcac
cccaacctctcccagatgaccacagccatgaacacaatgggaagcctcacgccccagccg
ggagccgccatggttacccccggcccgcagcagttcttcaaccccggggctggtttcccc
ttccccggtaccaacgtcatgccatgccccatgcctacgatgccctcgctcatgcaaact
gccatgcctatccagacccaacggccagcctctgggtccagcacccctcagtcgtatagt
caagtaccagtcgaccaggattgtgcagagtcgcccctcttccactctcgctgctcctcc
ccgctcaacctgctgcagcttgtggaggagtcgcctagcaaccggctggaggtcgccacg
gcgctggctgcttccgcgcaacaggccacgatcccctcacaagggactagggggagatcg
ccagatgactccaaggagaacgccaatgattccaaccaggatggtgaatccacccccagt
gacctactggacctgctcctgcaagaggactcccgctcaggctccgcgtcctctgggtcg
ggttctgactccttgggcactgtgtccaacggctgcagctcctcaggcagtggaactagt
cgcagtcggagtagccgcaccagcaagtactttggcagcatcgactcgtcagagaacgac
cactgccgcaagcagccagcaggtggcagcagagcaggaggagacggggaggagcaattg
attaagtgtgtcctgcaggatcccatctggctcctcatggccaacaccgaccacaaggtg
atgatgacgtaccagctgccgaccaaggacagggagacggtgctgcggcaggaccgcgag
gccctgagggccatgcacaaacaccagccccgcttcactgaggaccagaagagagaactg
agccaggtccacccttggatacgtaccgggcgcctgccccgcgccatcaacatctcggca
tgtatggggtgcaagtcttcccccttaccagagagcaccgtggaccagggaggagaggct
cgcagagaagaggggcacgcggcgcactctgaaacacaaggcaacgaccaggaaatgaca
acagaggagcaggaagtgacctggccaacgggggagaagaaagccagggctggtgaaacc
tacatgacccactga

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