KEGG   Oncorhynchus gorbuscha (pink salmon): 124015064
Entry
124015064         CDS       T07892                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124015064 (larp1)
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124015064 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 124015064
NCBI-ProteinID: XP_046185936
LinkDB
Position
LG02:106078932..106136181
AA seq 1116 aa
MATQVETLLPNNPLIKEEEHGHASKTIQHGDDCLEKGAKQTGVADDGGNMKADNSELGGV
AMKEQNSKQAKEESNNQEKDILDQEKHTTGQTEDYVKCSKKEFAEAPPPKVNPWTQKMNA
VTVVNVNGQAHHELPPTTGPAKVVKAPNPRPRRGGKVGDFGDAMNWPTPGEIATKETQIE
VVTGIVSCPMPVRQVREVSSPRRSPAPKKPVVKKEWKEKRDPNEESKENQKAKSDDSGEE
KNGDDDSQKNGQKKKGNKHKWVPLMMEVKSEGPRERSASRNNTRQNEVPRMPPNNRNDLR
DWHSGKYERECREDHDEVSSVKSEGAPFRAGFRGRGRGRGRGRGRGRGGSRGHYDYHYGY
KAYDGKDGAYGQKFGAPVTYYYDNMSSNDLYSVDQDLLKDYIKRQIEYYFSLDNLERDFF
LRRKMDQEGFLSLGLVASFHRVQALTTDVNLIIESLKGSKEVEIIEMKIRRKVEPEKWPL
PGLSMGPDHNQVDLTQLIHCPEFVPRQTPAEQTGSPRSSTPTRGSTRASMQPKVEQDVSN
LKSMSKGLSASLPDLDSESWIEVKKRPRPSPARPKQKEEAVSPVPQPGPSPIPSVSPAQA
SATGAKEEQDEPEELDFMFDEEMEQIDGRRNTFTDWSDDDSDCEIADNDVNKILIVTQTP
PYLRKHPGGDRTGHHTSRSKLTNELVKVINDGLYYYEADLWDDNYEPEYATIKQEVENFK
KVHLISREEFDCLTPEPPVDPNQEVPPGPPKPQQIPVDALANKLFGAPEHSTIARSLPTT
VPDSPNYRSARTPRTPRTPHRKDPPMTPRFYPVVKESRPVDAMTPRKRKTRHSSNPPMEC
HVGWVMDSREHRSRTASVSSNASPSEGTPALGGIGCTPQSLPKFQHPSHELLKENGFTQH
VYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYR
YGLECLFRYYSYGLERKFRPDIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKNKNMEID
PKLQECLSKFKRLEDFRIDPPMEEGGRKRHSSSGDGRRRHPSQGSSRPHSQTGFGPAPIA
LIAQAPAKDDAKNSSQSQRPSAQASATTASDTKPPK
NT seq 3351 nt   +upstreamnt  +downstreamnt
atggccactcaggtggagactctcctacccaacaatcctcttatcaaagaagaggagcat
gggcatgcgagcaagacgatacaacacggagacgactgtctggaaaagggggccaagcag
acgggtgttgccgacgacggtggcaatatgaaagcagacaactcggaactggggggggtc
gcaatgaaggagcaaaactccaaacaggcaaaagaagagagtaacaatcaagagaaagac
atcctggatcaagaaaagcacacgaccggacaaacggaagactatgtgaaatgtagcaaa
aaggagtttgctgaagcacccccgcccaaggtgaacccatggactcagaaaatgaatgcg
gtgaccgtggtcaacgtgaatggacaagcacatcatgagctgccgcccacaacaggcccg
gccaaggtggtgaaggccccaaatccccggcctcggagaggaggaaaggttggggatttt
ggagatgctatgaactggccgacaccaggggagatcgcaactaaagagacgcagattgaa
gttgtgactgggattgtgtcatgccccatgcctgtcaggcaggtcagagaggtgagctcc
ccacggagatccccagcccccaagaagcccgtggttaagaaagagtggaaagagaaacgt
gaccccaacgaagaaagcaaggagaaccagaaggccaagtcggacgactctggagaggag
aagaacggagacgacgactctcagaaaaatggacagaagaaaaaagggaacaagcacaag
tgggtgccgctgatgatggaggtgaagtccgaggggcccagagagcgctctgcatccagg
aacaacacccgtcagaacgaggttcccaggatgccccccaacaacaggaacgacctccga
gactggcacagcgggaagtacgagcgtgaatgtcgtgaggaccatgatgaggtgtccagc
gtgaagagtgagggtgctcccttccgtgccgggttccgggggcgtggccgtggcaggggt
aggggacggggacgaggcagaggaggcagcagaggtcactatgactaccattacggctac
aaggcctacgacgggaaggacggcgcctacggccaaaagtttggcgctccagtgacctac
tactatgacaacatgagcagcaacgacctgtactccgtagaccaggacctgctcaaggac
tacatcaagaggcagattgagtattacttcagccttgacaacctggagcgggacttcttc
ttgcgcaggaagatggaccaggaaggcttcctgtctcttggcctggtcgctagcttccac
agggtgcaggccctcaccaccgacgtcaacctcatcatagagtctttaaagggtagcaaa
gaggtggagatcatcgaaatgaagatccgccgcaaggtggaacccgagaagtggcctcta
ccgggtctttccatgggaccagaccacaaccaagtcgacctgacccagctcatccactgc
ccggagttcgtgccccggcagacgcccgctgagcagacagggtctccccggtcctccaca
cccaccaggggctctaccagggcctccatgcagcccaaggtggagcaggacgtgtccaac
ctgaagagcatgtccaagggcctgtcggcgagtctccccgacctggactctgagtcctgg
atcgaggtgaaaaagaggcccaggccctccccggcccgacccaagcagaaggaagaggct
gtctccccggtgcctcagccaggccccagcccgatcccctcggtctccccagcccaggcc
tcggccacgggagccaaggaggagcaggacgagcccgaggagctggacttcatgtttgac
gaggagatggagcagatagatggtcgcaggaacaccttcaccgactggtccgacgacgac
tcggactgcgaaatcgccgacaacgacgttaacaaaatcctcatcgtgactcagacgccg
ccttacctgcgcaagcacccggggggcgaccgtacgggccaccacacgtcacgctctaag
ctgaccaacgagctggtgaaggtgatcaacgacggcctgtactactacgaagcagatctg
tgggatgacaactacgaacccgagtacgccaccatcaagcaagaggtggagaacttcaag
aaggttcacctgatcagccgagaagagtttgactgcctgaccccagagccccctgtcgac
cccaaccaggaggtacccccgggaccccccaagccccagcagattcccgtagacgccttg
gcgaacaaactgttcggtgcccccgagcattccacaatagcacgctccctcccgactact
gtgcctgactcgcccaactaccgcagtgcccggacaccccgcacgccacgcaccccgcac
cggaaggacccccccatgacgccccgcttctaccccgtggtgaaggagagccggcctgtc
gacgccatgacccccaggaaaaggaagaccagacacagctctaaccccccaatggagtgc
cacgttggctgggtgatggactcacgagaacaccggtcccgtactgcctccgtcagctcc
aacgccagcccctcagagggtacccctgcattggggggaattggctgtaccccccagtcg
ctccccaagttccagcacccctcccacgaactgctcaaggagaacggcttcactcaacat
gtttaccacaagtaccgtcggcgctgcctaaacgagcgcaagcggttgggcatcggccaa
tcccaggagatgaacacgctgttccgtttctggtcgttcttcctgagggatcacttcaac
aggaagatgtatgaggagttcaggcagctggtggtggaggacggcaaggagggatacagg
tacggtctggagtgtctgttcaggtactatagctacggactagagaggaaattcagacca
gacatcttcaaagacttccaggaggagaccatgaaagactacgaagctggccagctgtat
ggactagagaagttttgggcgtttcttaaatactccaaaaacaagaacatggagatcgac
cccaagctgcaggagtgcctgagcaagttcaagcgtcttgaagatttcagaatcgatccc
ccgatggaggaggggggtcgcaagagacactcatccagtggagacggtcgtcgccgccac
ccctcccagggttccagccgcccccacagccaaactggcttcggcccggccccgatcgcc
ctgatcgcccaggcccccgccaaggatgatgccaaaaacagcagccagagccagcgaccc
tcggcccaggcctcagctaccaccgcatcagacaccaagccaccaaagtaa

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