Oncorhynchus gorbuscha (pink salmon): 124015133
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Entry
124015133 CDS
T07892
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124015133 (rhbdl3)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124015133 (rhbdl3)
Peptidases and inhibitors [BR:
ogo01002
]
Serine peptidases
Family S54: Rhomboid family
124015133 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
AIF-1
EF-hand_9
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
124015133
NCBI-ProteinID:
XP_046186047
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Position
LG26:complement(10127532..10181646)
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AA seq
408 aa
AA seq
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MPDASRDVPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDSESSGFISTE
RFRDLLAAHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRQAILQGGRQ
LKGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAV
FMYYGLQLDRWVLQVSSPHFLRGPLPYHPQLRIQAWRYLSYAFMHAGIEHLGLNMAMQLL
VGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNW
SGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVV
VLQNYEQRLQEQSLFWIFFSVYFLFVLCAVFWNVFAYSLLDVRLPPTP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgtctcgggacgtgccggtgcattcctctccagcagtggcagcgaacgcc
gagggagacgagatagaagtgctggagagtatcgatgtccttcccgtggccccagaggac
caatggaaatctctgttcgacaagttcgactcagagagttcaggcttcatcagtacagag
cggttcagagacctgctggcggcccacggctcggagctggaccctcacaagctggaggtt
ctattggccctcgccgacggcaacgcggacggaaagatctgctaccaggactttgtcaac
ctgatgtccaacaagcgcagcaacagcttccggcaggccatcctccaggggggtcgtcag
ttgaagggggccggggccctgggggaggaggtgggtctgggtctgtcccagaggctggtg
aggcacatcgcctatgagaccctgccccgggagatcgacaggaagtggtacttcgacagc
tacacctgctgcccaccaccctggctcatcctggcgatcaccatcgctgaggtggcagtg
ttcatgtactatggcctgcagttggaccgctgggtgctgcaggtgtccagtccccacttc
ctgaggggcccactgccctaccacccccagctacggattcaggcctggagatacctcagc
tatgccttcatgcacgcagggatagaacacctgggtctgaacatggccatgcagctgctg
gtgggagtccctctagagatggtccatggagcgctgaggataggactggtctacgtgtgt
ggcgtactggcaggctccctggccgtgtctgtcactgatatgactgctccggtggtgggg
tcatctggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactgg
tcgggtatgaaatgtcagtttaagctgttccggatggccatggctctggtctgcatgagt
gtggagttcggccgtgccgtgtggctgcggttctacccgccggccttcccgccctgcccc
aaccccagctttgtggcccacctggggggtgtgatggtggggctcaccctgggggttgta
gtcctccagaactacgagcagcgtctccaagagcagtctctcttctggatcttcttctcc
gtctacttcctctttgtcctctgtgcagtcttctggaacgtcttcgcctacagcctgctg
gacgtccggctcccccccacgccgtga
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