Oncorhynchus gorbuscha (pink salmon): 124015154
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Entry
124015154 CDS
T07892
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04517
IgSF CAM signaling
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124015154
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124015154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124015154
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124015154
Intermediate filaments
Intermediate filament-binding proteins
124015154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
124015154
NCBI-ProteinID:
XP_046186100
LinkDB
All DBs
Position
LG26:16441689..16551888
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHCLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIENYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELSLRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKSRRQRLEMNLGLQRVFHEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRAAHMEFYYQELTQLAAERRARLEESHRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGTVRLLSQHRTLENEMSGRAGHLQHTITEGQAMADGGHFGAAKIRER
ITNLRAQWAALEELAAARKAHLEEAYALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAGALPEVQVQSEQVKGRLAGIEERYKEVAELT
RFRKQALQDALALYKMFSEADACEMWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKAQQDKLNTRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAIKGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAVASEETPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTTQAEAFLNNQEYMMAHTEMA
TTLEGAEVAIKQQEDFMTTMDANEEKINSVVEAGRRLATDGNINADRIQERAASIDNRHK
KNRKATLELLMRLKDNRDLQKFLQDSQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKTELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGNVTEEVDGQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQRLADLQQLWGLMIEETEKRHARLEQSHNAQKYYFDAAEAEAWMSEQELYMMSED
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHTESERIGMRQSQVDKL
YAGMKDLTEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFSRDTGNIGQERVDAVNRLSDELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRIQDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLESCDVRRGRLLDTGDKFHFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDTRNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGPELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPAQDSPRQSGVENGLQNGLPSDQDSPQNGLDRVEIMNGVAEQNSKDPSPIPSP
TADRRGKGSLSSTLLTQNHDTPVAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKGAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVADGNEYLFQAKEEEE
MSTWIQAILNAGTADKVSITPSNQSTPASSRAQTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcggaatatgaacacatggagatcacgcagcagtacagtagcagc
gacacggtcaacaaccgctgggatgacgagtgggataatgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatgggcgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggccggatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacattgtt
gacggcaaccactgcctcaccctgggcctcatctggaccatcattctcaggttccagatt
caggacattagcgttgagactgatggagacaacaaggagaagagatcagccaaggatgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaacttc
agcaccagttggcgagacggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtctaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggcttaccaagctcctggacccagaggatatcagtgtg
gaccaccccgatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtcgaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaactatgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggttgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggctaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctgtctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggttg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccagcggtggac
gcggccaccaagaagcatgaggccatcgagactgatattacagcttacgaggagcgtgtg
caggccgtggtgtccgtcgctaaggagctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgctggagcttctgaag
tcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccatgagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggctgacatcggc
atccaggccgaccgagtcaaagctgtcaacaacaatgctcagaagtttgccatcgatggc
gatgtttacaagccctgtgaccctcaggtaatacgcgaccgcgcggcacacatggagttc
tactatcaggaactgacccagctggctgccgagcgacgggcccgcctagaggagtcccac
cgcctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcactgtgcgcctgctgagc
caacaccgcaccctggagaacgagatgagtggccgtgcaggtcacctgcagcacaccatt
actgagggccaggccatggccgacggcggccacttcggcgctgccaagatccgtgaacgc
atcaccaacctgcgggcgcagtgggcagcgttggaggagctggcggccgcgaggaaggcc
catctggaggaagcgtatgccctgcaccagttccaggcggatgcagatgacgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagtggtgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaaacacaaggacgccgccgccgaggtggccagctatcggccg
gtgatagatgcgctccatgagcaggcgggcgccttgcctgaggtgcaggtccagtcggaa
caggtcaagggccgtttggcaggcatagaggagcgttacaaggaggtggccgagctgacc
cggtttagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgagatgtggatcgatgagaaggagcagtggctcaacagtatggagatccca
gagaagctggaagacctagaggtcatacagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgttgtgaaccagatcgccaggcagctgatgcacaac
ggacaccccagtgagaagaacatcaaagcccagcaagataagctcaacaccagatggagc
cagttccgggatctggcagaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactatcacctggactgcaacgaaaccaagtcatggatacgcgagaagactaaggtcatc
gagtccacccaggagctgggcaatgatctgacgggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggcgag
gcagagcggctggccggcgagcacccggaccaggccaaggccatcaagggccgcctggcc
gagatcactgccgtgtgggaggagatgaaggccacactgcgtaatcgcgaggagtccctt
ggtgaggccagcaagctgcagcagttcctgcgcgagctggatgacttccagtcttggctg
tcgcgcacacagacagccgtcgcctctgaggagacacccaacacgctggccgaggcagag
aagctgctagcgcagcacgagggcatcaagaacgagatccgcaactacgaggaggactac
cagaagatgcgcgacatgggtgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgaggcagcggctacaggccctggacacgggctggaatgagctgcacaagatgtgg
gaaaaccggcagaacctgctgtcccagtcccacgcctaccaactgtttctcagggacacc
acgcaggccgaggccttcctcaacaaccaggagtacatgatggcccatacagagatggcc
actacgcttgagggggccgaagtagccatcaagcagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagatcaacagtgtggtggaggctggcaggcggctggcgactgat
ggcaacatcaacgccgaccgcatccaggagagagcggcgtctattgacaacagacataag
aagaaccgcaaggctactctggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattcccaggagctgtccctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaaaattgagaaggatgggatg
cagctggtgttagagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtctaccacccagaccaaagcccagtgcctgtttgac
gccaacaagaccgagctgttcacacagagctgtgctgacttggacaagtggctgggtggc
ctggagggacagattcaatctgatgactatggcaaagacctgaccagcgtcaatatcctg
ctcaaaaagcagcagatattggagaaccaggtggaggtccgtcagagggaagtggtggag
ctgcagagccaggcactggtcctcagccaggaagggaatgtcacagaggaggtggatggc
cagagacagatggtggagcacaagttcaaagagctgctcgacccgctgaggaagagaaag
aacttcctggtggcctcccgtgagatccaccagttcaaccgcgacgtggaggatgagata
ctttgggtcgaagagaggatgccaattgcaacctccacagagcatggtcacaacctacag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgacgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcgcctggccgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcacgcccgactggagcagtcccacaacgcccagaagtactacttt
gatgccgccgaggcagaggcctggatgagcgagcaggagttgtacatgatgtctgaggac
aaagccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacaa
tctgtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatacagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgactgaggagaggcggggcaaactggatgagaggttccgc
ctgttccagctcaaccgcgaggtcgacgacttggagcagtggattgccgagcgggaggtg
gtggctggatctcacgagctgggacaggactacgagcatgtcactatgctccaggagcgc
ttccgggagttttcccgtgacacaggcaacatcggccaggagcgtgtggatgccgtcaac
cgcctgtccgacgaactgattaatgcgggccacgcagatgccgccacggtggctgagtgg
aaggacggcctcaacgaggcctgggctgacctgctggagctcatcgacacgcgcacacag
atcctggctgcctcttacgagctacacaagttctaccacgacgccaaggagatcctgggc
cgcattcaggacaaacacaagaagcttcccgaggaggtgggacgtgaccagaacacggtg
gagacactgcagcggatgcacaccaccttcgagcacgacatccaggccctgggaacacag
gtgagacagctgcaggaggatgccgtccgcctccagtcagcttacgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggagtcc
tgcgatgtccgcagaggccgcctcctggacacgggtgacaaatttcacttcttcagcatg
gtgcgcgatctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacacccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctctttggcccggagttggggcagagcgtggacgaagtggagaaactgatcaagaggcac
gaggcttttgagaagtcggccgctacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagagagaatgcgaaaa
cccccttcgccggagcctttaccggcgcaggactcaccacggcagagtggagtagagaac
ggactgcagaacggactgccctcagaccaggattctccacagaacggcttggatagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccgaccggcggggcaagggcagcctgtcctccacgttgctgacccagaaccacgat
acgcctgtggctcagctggagggcttcctgcatcgcaagcatgaatgggagggacacaac
aagaaggcctcaagcagatcatggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaagggtgctggtcaaggcatcccctaccataatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggactacaaaaaaaagaagcatgtc
ttcaaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaggaggag
atgagcacatggatccaggccattctgaatgcggggacagctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcgagccgagcccagaccctgcccgccactgtcacc
ctcaccaccgaatccagcccgggcaagcgggagaaagacaaagaaaaggacaaggagaag
cgattcagcctctttggcaagaaaaaactataa
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integrated database retrieval system
