Oncorhynchus gorbuscha (pink salmon): 124015217
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Entry
124015217 CDS
T07892
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo00514
Other types of O-glycan biosynthesis
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124015217
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124015217
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124015217
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124015217
Glycosyltransferases [BR:
ogo01003
]
O-Glycan biosynthesis
O-linked Gal type
124015217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
DUF6492
Motif
Other DBs
NCBI-GeneID:
124015217
NCBI-ProteinID:
XP_046186219
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Position
LG26:complement(21470009..21501448)
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AA seq
609 aa
AA seq
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MHRYIFLLSTALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAVWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSAREMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPEYSWAFDDIIVFAFSAHMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPVKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEISERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEHFEERDLKAFSAEPL
LVFPTHYTGDSGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatcttccttctgtccaccgccctgacgttactattctccggaccagct
caaggatacttccccgaagaacgctggagccccgaatcaccacttcttgcccctcgggtc
ctcattgcccttgtctgccgtaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcagtttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctacgcacacgtgatgaagctgcggcaggcagcactggactccgca
agagaaatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaacaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
cctgcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagttggccttccacccc
cctcacccagagtacagctgggccttcgatgacatcattgtctttgccttctccgctcac
atggcagatgtgcagatgttcctatgtaacagagagacgtatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctgcattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccttcggagtacatcccggcccccgtaaagata
caagataagctgggctttgatgaggtgttcatgatcaacttaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgacccataccacggtaggcccctcaccaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatctcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcagaaagaggatgcaggtg
gaccgccctgagaagtccgtacccaatatacacaacctggtggaggcagactactcctat
tggacgctgggttatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtggatgagttcctccctgtcatgttcaataaacaccctgtc
tcggactacatggagcactttgaggagcgggacctgaaggccttctcggccgagcccctg
ctagtgttccccactcactacacaggagactcgggctacatcagcgacacagagacctct
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggatgaactatga
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