Oncorhynchus gorbuscha (pink salmon): 124015259
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Entry
124015259 CDS
T07892
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124015259 (recql5)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124015259 (recql5)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124015259 (recql5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
SRI
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
KIX_2
Motif
Other DBs
NCBI-GeneID:
124015259
NCBI-ProteinID:
XP_046186328
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All DBs
Position
LG26:complement(37363549..37379042)
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AA seq
1048 aa
AA seq
DB search
MTSIKKALKTHFGFDKFRSQKQEDVVKAVVKGDRDVFVCMPTGAGKSLCYQLPAVLAKGI
TLVISPLIALIQDQVDHLRDLNIPACSINSKLPAGERRLILADLESESPRLKLLYITPEM
VASSAFQPCLTDLLSRSLLSYLAVDEAHCVSQWGHDFRPDYLKLGSLRARLPGIPCVALT
ATAPQKVQEDIAKSLRLRSPLSFATPVFRSNLHYEVVYRELLEDPYKHLHAFIREALTLG
EGPKGQGCGIVYCRTRDGCETVAYQLTKLGVLAKPYHAGLKAGDRTEAQTDWMQGKVLVI
VATISFGMGVDKSNVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDREQLNF
LIRKEVARKQAKRGSEKDQDKASITDFEAMVSFCEQEGCRHATISKFFGDQKPDCAGACD
YCRDPKAVRAQLEKGATLCTKTGAAWSTQPRGPFGFDRDLYAGGRKGYGFERHDEEGWES
GGDDDGSEHRRKEFGDLFKKQMNLRKVSEGHKDSFIPPDDNCLLREASSQKIPRLTVKAR
EHCVALLQEALNNHQVAAADTHRSETLSLAVDIEHEVFKITKSSNLYKAAVLKRVSEMKK
GGAASAGGGGREGTSGSGESTEIKTESKDEAASSSSSLTEEQQGFTPASQIYSLKRKRIG
AGLRGSSNPFQTASELLRASNCEGSTTGPGANSGTGSGGPNCLAGSGESAGEEERGKRKE
TNTGDTAPTISSSIRAKANAVSAFLNSPTKTGGKALSKKQKLAEAAKNSCNITQYFGRKP
IEKSQEVEIRTNDVSSQAFSIPPQSLPTQEITPATVSMDTIPMDTSPMEIIPMETIPIET
IPMDTIPTEINNLDNDDDEEGKEEAKLDLDSITVQNAHESKAKSLLKLRLCADSEESEAL
PSAKRSCPLQDSRKKVTFNPKVQETVLEPGSPSTAPKPVSLKEVADIVVRCLDPFYTQGK
FATKELFKSFARYLSHLLAEGRSRGRGQVKMQARNLIKKFFSSVKRCESEADWKHLKGPH
STETSEHRGMGGGGTMNRKVEEDNNLGV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattaaaaaggcgttaaaaacccattttgggttcgataagttccgatcccag
aagcaggaggacgttgttaaagcagttgttaaaggtgaccgggatgtttttgtgtgcatg
cccaccggggcagggaagtccctctgctaccaacttcccgcagtgttggctaagggtatt
accttggtcatatcccctcttatcgccctcatccaggaccaagtggaccacctaagggac
ctgaacattcctgcatgctccataaactccaagctccctgcaggggagcgccgtctgatc
ctggccgatctggagagtgagagccccaggttgaagctgctttacatcaccccagagatg
gtggcctcctctgccttccagccctgccttacagacctactctcccggagcctcctctcc
tacctggctgtggacgaggctcattgtgtctcccagtgggggcatgacttcagaccagac
tatctcaaactgggcagtctgcgtgcccgtcttcccgggataccctgcgtggcgctgacg
gccacggcaccccagaaggtgcaggaggacatagcaaagtccctgaggctgcgatcaccg
ctgtcctttgccacacctgtgtttcgcagtaacctgcattatgaggtggtgtacagggag
ctactagaggacccctacaagcacctacatgccttcatcagggaggccctgaccctgggg
gaaggccccaaaggacagggttgtggaattgtgtactgtcggaccagagatggctgtgag
acggtggcttaccaactgactaagctgggagtcctggccaagccttaccatgcagggttg
aaggcaggagatcgcacagaggctcagactgattggatgcagggtaaggtgcttgtcatt
gtggccaccatcagctttggcatgggggtggacaaatctaatgtcaggtttgtggcccat
tggaaccttgccaagtcactagccagttactaccaggaatctgggcgtgcggggcgagac
ggcctgccctcttcctgcaggacgtactactcccccaaggacagggagcagttgaacttc
ctcatccgcaaggaggtggcccgcaaacaggcaaagcgtggctcagagaaagatcaggac
aaggcttccatcacagacttcgaggccatggtgtcattctgtgagcaagagggctgccgc
catgccaccatctccaagttctttggggaccagaagccggactgtgcgggggcctgtgac
tactgtcgtgaccccaaggctgtgcgggcccagctggagaagggggccactttgtgcacc
aagactggagcagcttggagcacacagcccaggggcccgtttgggtttgaccgtgacctc
tacgccggggggaggaagggctacggctttgagaggcatgatgaggagggctgggagagt
ggtggtgatgatgatggctccgagcatcggaggaaggagtttggagatctcttcaagaaa
caaatgaacctgcgcaaggtgtctgagggacacaaagattcatttatccccccagatgat
aactgcctactcagggaggccagcagccagaaaatccccaggctcactgtcaaggcccgg
gagcactgtgtggccctgttacaggaggctctgaacaaccaccaggtggcagcagcagac
acacacagatctgaaacactctccttggcagtggatattgaacatgaggtcttcaagatc
accaagtcttccaacctgtacaaagcagctgtcctgaagagagtatcagagatgaagaag
ggaggggctgcctctgcaggaggaggaggaagagaagggaccagcggctctggggaatcc
acagagataaagactgaatccaaagacgaagcagcctcctcctcttcctctttgactgag
gagcagcagggcttcacgcctgcctcacagatctactcactaaagcggaagagaatagga
gcaggtctgaggggctcctccaaccccttccagactgccagtgagctgctgagggcctct
aactgtgagggctccactacaggtccaggggccaacagtgggacagggagcgggggcccc
aactgcctggctgggtctggagagtcagccggtgaggaggagagggggaagaggaaggag
acaaatactggagatacagcaccaaccatcagctcctccatcagagctaaagccaatgca
gtctctgccttcctgaacagtcccaccaagacaggaggcaaggccctgagcaagaagcag
aagctagcggaggctgctaagaactcctgcaacattacccagtactttgggaggaaaccg
attgaaaagagtcaagaggtggagataagaaccaatgatgtgtcatctcaggccttttca
ataccaccccagtcactccccactcaggaaatcacacctgctactgtctccatggatacc
atccctatggacactagtcccatggaaatcatccccatggaaaccatccccattgaaact
atccctatggacaccatccccacagaaatcaacaacttggataatgatgatgatgaggag
ggtaaagaggaagctaaactggacttggactctatcacagtgcaaaatgcacatgaaagc
aaggctaaatcattgctaaaactaaggctatgtgcagacagtgaagagagtgaggccctc
ccctcagccaagcgcagctgccccctacaggacagcaggaagaaggtgacctttaacccc
aaagtccaggagactgtactggagccagggagcccaagcacagcccccaagcctgtgtct
ctgaaggaggtggctgacattgtggtgcgctgtctagaccctttctatacgcagggcaag
tttgccaccaaggagctgttcaagtcatttgcccgctacttgtctcatctactagcagag
gggaggagtaggggaagaggtcaagtgaaaatgcaggccaggaatctgataaagaagttc
ttcagcagtgtgaagcgctgtgagagtgaagcagactggaagcacctgaagggaccacac
agcactgagacctctgagcacagagggatgggaggaggcgggactatgaacagaaaggtg
gaggaggataacaacctgggggtctga
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integrated database retrieval system
