Oncorhynchus gorbuscha (pink salmon): 124015275
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Entry
124015275 CDS
T07892
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124015275
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Others
Others
124015275
Endosome - Lysosome transport
124015275
Endosome - Golgi transport
124015275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
124015275
NCBI-ProteinID:
XP_046186353
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All DBs
Position
LG26:7507261..7751431
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AA seq
1252 aa
AA seq
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MDTWLGFCSGLHLTLCTWFLISAHTQLNAKAEITCASCQSPVQLHLKELQLDIGTHAADG
TRQAARALEQVRLERQLLGVTDQNTGVPSDTQQAGVLVNEPRFNDDGITPKVALEDLTGS
SENEERYRGEYNIGVNDLGKVKDGAEDVALRRAKRSGPETPEFRESLMTGGPGLEGETSD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGTSRGDDPKLSSTTFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTEEDWALAYSHDQKLYASLDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCRALTCSEPNRNYPFPGY
IDISSLVVQDDYMFIQVTTAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTQGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSELSYNNVGMFISSDAGNNWRHIFEEEHNVWFLDKGGALVAVKQPTV
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICR
AHDFECDYGYERRREGNCLPAFWFNPAVVSRSCSQGQKYLNSTGYRKVVSNNCVKGVKDM
YTPRKQMCPNRAPKGLSLSTREGKLTADLHTNVTFLVHLDEGDSMRTNIQLDFGDGTAVS
YSNLSWIEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHVTCPVEHVQLLAPFVAIKN
KEVNLTAVVWPIHSRTVTYFWWLGNNTEPVISLDGSISYTFTSEGMNTVTVQVSSANTIL
QDTKMIAVQEFFKSLLLSFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFPEDQLLVAV
FPGVPTAAELFLLPHKNQSEGRKKCEEELEQISEILASALNQNLVEFELKPGARVIVYIT
QLTLAPLVDSMPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMI
GSVSQSDSTPKITLSEFSTAKEVMEKEMDARVKRRIGHACESTREIPNCTSV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttctgctcaggcttgcacttaactctgtgtacctggtttctg
atctccgctcatacccagctaaatgccaaggcggagataacttgcgcatcgtgccagtcg
ccggtccagctacacctgaaggaattacagctggatatcggtacgcacgcggctgatggt
actaggcaggcggccagagctctggaacaggtccgactggagcgccagctactcggagtt
actgaccaaaatactggagtaccaagcgacacccaacaggcaggtgttcttgtgaatgag
ccgagattcaatgacgatggaattaccccaaaagtcgctctggaagatttaactgggtct
agtgaaaacgaagaaaggtaccgtggggaatataatattggggtgaatgatttgggtaaa
gtcaaggatggtgctgaggatgttgcgttacggagagcgaagcgaagcggtcccgaaact
cccgagtttagggagagccttatgaccggtggccccggtttagaaggagagacatcggat
gagagaaggagtcctggtccgttactggacggacacagactgggccgatctgaattcaag
tggaacagggacgagggtcgagggacttccagaggagatgatcccaaactaagcagcact
actttcgccttgaccggagactcagcgcataaccacgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactctacgactttcacctggggagtgttaca
gagagcaccttgtggagatcaacagactatggatccacctatgagaggatgaatgacaaa
gtgggatctaagactgtgctgagttatttgtatgtctgtccatccaacaagagaaagata
atggtgctgacagaccctgagtttgagagcagtgtgctcatcagctcggatgaaggagcg
agctatcagaaataccgcctcagcttctacattctaagccttctgttccatccaacagag
gaggactgggctctagcctacagccacgaccagaagttgtacgcatcactggactttggg
agaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggttcacatggaggcacacacccccaatggacgtatacagtat
gtaacatgccgggctctaacatgctcagagcccaacagaaactatcccttccctggatac
atcgacatcagctcactggtggtccaagatgactatatgtttattcaggttactacagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgccc
aaatattctctgcctaaggacctccacatcgtcagcacagacgagcaccaggtcttcgcg
gcagtgcaggagtggaaccagaacgacacgtacaacctgtacctctccgacacccagggc
atcctcttcaccctggccatggagaacgtcaagaccacccgtggcctggggggaaaccag
atgctggacctgtatgaggtagcaggtatcaaaggtatgctgatcgcaaacaggaggcta
gacaaccaggtgaagacctacataacctacaacaagggccgtgattggaggttactgcag
gccccggcgacagacttggctggcaacgacatccactgtatactgcccttctgttcgctc
catctccaactgcagacgtctgaaaacccctacctgtcaggcagcatatcaaccaaggcc
tcagcaccgggaatcatagtggccacagggaatattgggtctgagctgtcgtacaataac
gttggaatgttcatctcatctgatgctggtaacaactggagacatatattcgaggaggaa
cacaatgtctggtttctggataaaggaggggcccttgtcgctgtgaaacaaccaaccgtc
cccactaggcatttacaaatcagttttgatgaagggcgtcagtggaccagacacagcttc
tccttggtgcctctgttcgtggacgggatgctggtggaggcagggacagagaaccagatc
atgacgttttttggacatttcagccataggtctgagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aagggcgagccgtgtgtgatgggccagaaacagatctatatgaaacgcagaccaggaaac
tattgcatgctgggaaaagactacgccaaagtcctctctgctgaatcgtgtatctgtcgg
gcccacgactttgaatgtgattatggttatgaacggcgtagagaaggaaactgtctacca
gcgttctggttcaacccagctgttgtatcaaggagctgcagccaaggacagaagtacctc
aacagcacagggtaccgaaaagtggtgtccaacaactgcgtcaagggagtcaaggacatg
tacacacccaggaagcagatgtgtcccaacagggctccaaaaggcctttctctctccacc
agagagggcaagcttactgccgacctgcacaccaacgtcaccttcctagtgcatctggat
gagggggactcaatgagaaccaacatccagctggatttcggagatggcacggcagtctcc
tactccaacctgagctggatcgaagaggggatcagacacgtttacaagacggctgggata
ttccgtgtctcggccttggcggagaacaccctgggatttgatactaccaccttgtacctc
catgttacgtgtcctgtggaacatgtccagttgctggctccatttgtggccatcaagaac
aaggaagtaaacctaacagcagtggtgtggcccatccactccaggactgtcacctacttc
tggtggctggggaacaacactgagccggtgatcagcttagacgggagcatctcatacacc
ttcaccagcgagggaatgaacactgttacggtccaagtgtcttcagccaacaccatactg
caagacaccaagatgatagcagtacaggagttcttcaaatctctgcttttgtctttctcc
cctaatctggacgagtacaaccctgatgtccccgagtggagacaggatgtggggagagtc
ataaagaaggctctgctccaagtgtcagactttccagaggatcagctgttggttgcagtg
tttccaggtgtgccaacggccgctgagctcttcctgttaccacacaagaaccaatcagag
ggcaggaaaaaatgtgaggaggagctagagcagatctccgagatacttgctagcgctctg
aaccagaatctggtggagtttgagctaaagccaggagcaagagtgattgtttacatcacg
cagctaactttggcacccttggtggattccatgccgagacacagcagttcagccatgctg
atgctcctatcagtagtattcctgggtttagcagtgtttctcatctacaaattcaagaga
aaaatcccctggattaacatatacgcggaggtgaaccaggagaaagagcaggagatgatc
ggttcggtcagccagagcgacagcacgcctaagatcaccctcagtgagttctctacggcc
aaagaagtcatggagaaggagatggacgccagggttaaacggcgaattggacatgcctgc
gagagcacaagggagattcctaactgtactagcgtgtaa
DBGET
integrated database retrieval system
