Oncorhynchus gorbuscha (pink salmon): 124015302
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Entry
124015302 CDS
T07892
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
ogo04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124015302 (smc3)
04114 Oocyte meiosis
124015302 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124015302 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ogo00535
]
124015302 (smc3)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124015302 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
124015302 (smc3)
Proteoglycans [BR:
ogo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
124015302 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
OmpH
MFD_D3
Motif
Other DBs
NCBI-GeneID:
124015302
NCBI-ProteinID:
XP_046186412
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All DBs
Position
LG26:2696699..2723161
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKSNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLQTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRHLRDAQQDARDKVEETERVVREKKSKISAMKEEKEQLSSERQEQIK
QRTKLELKSKDLQEELAGNSEQKKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEREER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREELEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILTEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSQQFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTMLTATSSELEGINKRIKDTLARSEDLDVLIDKAEIEVKDHAKS
MDRWKNVEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELERGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGTDSEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ISAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtcatcattcagggtttccgaagttacagggaccagacagtggtg
gatcctttcagtccaaagtccaatgtcatcgtgggaagaaatggatcgggaaaaagtaac
tttttctacgccattcagtttgtgctcagcgatgaattcagccatcttcgccccgaacag
cgcctggccttgctccatgagggaactggtcctcgtgtcatctcggcttttgtggagatt
atatttgacaattctgacaacaggttgccgatcgacaaagaggaggtatccctccgccgt
gtcatcggcgccaagaaggaccagtacttcttagacaagaagatggtgactaaaaatgac
gtcatgaacctcttggagagtgctggtttctcccgtagtaacccctactacatcgtcaag
caggggaagattaaccagatggctacagccccagattcccagcgtctgaagctgctgcgt
gaggttgcaggaaccagggtgtacgacgagcgcaaggaggagtccatctccctcatgaag
gaaacagagggtaagagagagaagatcaatgagctgctgaagtacattgaggagcgtctc
cagaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaagatgagg
agggctcttgagtacactatctataaccaggagctcaacgagacacgtgccaagctggat
gagttgtcctccaagagagagacctgtggagacaagtccagacatctgagagatgcccag
caggatgccagagacaaagtagaggagacggagcgtgtggtgcgtgagaagaagtctaag
atcagtgccatgaaggaggagaaggagcagctgagctcagagagacaggagcagattaaa
cagaggaccaagctggagctcaaatccaaagacctgcaggaggagctggccggcaacagc
gaacagaagaaacgtctgctgaaggagcggcagaagctgctagagaagatagaggagaag
cagaaggagctgcaggagactgagcccaagttcaacactgtgaaggagagggaggagagg
ggcatcgccagactggcccaggccacccaggagagaacagacctgtacgccaagcagggc
cgtggcagccagtttacttctaaagaggagagggacaagtggatcaagaaggaactcaag
tccctagaccaggccatcaatgacaagaaaaggcagattgctgccatccataaagacctg
gaggacactgagaccaacaaggagaagaacctggaacagtatagtaaactggaccaggac
ctgaatgaggtgaagaccagggtggaagagctggacaagaaatactacgaagtcaagaat
aagaaggacgagctgcagagcgagagaaactatctgtggcgggaggagaacgctgagcag
caggccctggcagccaaacgagaggagctggagaagaaacaacagctccttagagcagcc
accggcaaggccattctgaacggtattgacagcatcaacaaggtgctggagcatttccgc
agaaaggggatcaaccagcacgtcatcaacggttaccatggcattgtcatgaacaacttt
gagtgtgagcccgccttttacacctgtgtggaggtcaccgcgggaaccaggttgttttac
cacatagtggagacagacgaggtgagcaccaagatcctgacagagttcaacaagatgaac
ctgcctggagaggtcaccttcctgcccctcagcaagctggacgtcagggacaccgcctac
cctgagaccaacgatgccatccccatgatcagtaagctgcgctacagccagcagtttgac
aaggccttcaagcacgtgtttggaaagaccctgatctgtcgtagcatggaagtgtccacc
cagctggccagggcattcaccatggactgtataacactggagggtgaccaggtgtcccac
cgcggagcactgacagggggttactatgacaccaggaagtcacgtctggagctgcagaag
gacatgaggaaggctgaggaggagctgggagagctggaggccaaactcaacgagaacctc
cgcaggaacatcgaacgtatcaacaatgagatcgaccagctgatgaaccagatgcaacag
attgagacccagcagaggaagttcaaggcctccagagactccatcctgtctgagatgaag
atgctcaaggagaagaggcagcagtccgagaagacgttcatgccgaagcaacgttcactg
cagtctctagaggccagtctccatgccatggagtccaccagggagtctctgaaggctgag
ctggggacagacctgctctctcagctcagtctggaggaccagagacgtgtggatgacctc
aacgacgagatcagacagctgcagcaggacaacaggcagctgctgaatgagaggatcaag
ctggaggggatcatgaccagggtggagacgtacctcaacgagaacctacggaaacgcctc
gaccaagtagaacaggagttgaatgagctgagagagactgagggaggcaccatgctcaca
gccacctcctcagagctggagggaatcaacaaacgcatcaaagatacactggcacgctcc
gaggacctggatgtgctaatcgacaaggcggagattgaggtcaaagaccatgccaagagc
atggaccgctggaagaacgtagagaaggaacagaacgacgccatcaaccatgacaccaag
gagttggagaagatgaccaaccgacagggcatgctgctgaagaagaaagaggagtgcatg
aagaagatcagggagctggggtccttaccccaggaggccttcgagaagtaccagaccctc
acactcaaacagctgttccgtaagctagagcagtgcaacacagagctgaagaagtacagc
cacgtgaacaagaaggccctggaccagtttgtcaacttctctgagcagaaggagaagctg
atcaagcgccaggacgagctggagcgaggacacaagtccatcatggagctcatgaacgtg
ctggagctcaggaagtacgaggccatccagctcacattcaaacaggtgtctaagaacttc
agtgaggtgttccagaagctggttccagggggcaaggccactctggtgatgaaaaagggt
gacacggaggggggtcagtcccaggacgagggggaggggggcaccgacagcgagaagggc
tcaggctctcagagcagtgtgccctctgtagaccagttcaccggagtcggcatcagggtg
tcgttcacggggaagcagggggagatgagggagatgcagcagctctctggaggtcagaag
tccctggtggccctggccctcatcttcgccatccagaagtgtgaccccgctcctttctac
ctgtttgatgagatcgaccaggccctggacgcacagcacaggaaggctgtctcggatatg
attgtagagctggcgggccatgcccagtttatcaccactacgttcagacctgagcttctg
gagtcagctgacaagttctacggagtcaagttcagaaacaaggtgagtcacattgacgtg
atctcggcagagcaggcgaaagactttgtggaggacgacactacccatggttaa
DBGET
integrated database retrieval system
