Oncorhynchus gorbuscha (pink salmon): 124015478
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Entry
124015478 CDS
T07892
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124015478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124015478
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124015478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
124015478
NCBI-ProteinID:
XP_046186639
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All DBs
Position
LG02:complement(109167607..109194566)
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AA seq
690 aa
AA seq
DB search
MKQVLEYALDRAEYIVESARQQPAKRRALSGGRKSLYQKLYELYIEECDKEPELKKLRRN
VNLLEKLVSQESVSCLVVNLYPGNQGYSLMLLGKNGSDSETIRLPYEEGQLLEYLDAEEL
PPVLVDLLEKSQVNIFHCGCVVAEVRDYRQSGNTKMPSFQSRHVLLRPTMQTLICDVHAM
TSDPHKWTQDDKFQLESQLLLATADPLCLDPSISVTCTANHLLYNKQKMNTHSMKRCFKH
HSRAALNRQQELSYLPTPPQLRLYDYLQRRKERKPAPSIDLKISKAGKCVDMWKQSRCQL
TVPKEIDVEKYAVVEKSVKLQESQPTVWPAEEVIDDYTFKCEVGGQRTTVSIFQSVGDPL
VYGKIYCAEEDSSDLHLVHPAFLIGSKRDADRFLSQYKGVYEQDVKCQVKMSRNSGIMGQ
NQLSASRETEPVVCPQVDGLSALVQSSGVLGKGVKHRPPPIKLPSGSGSSSSGNLYSSAQ
ATSGLLKCLTPPPGSGPGSAKPQSLSRKHSVELGGQLGQVGLLSPAALSPMASTQRSGTP
KPSTPTNTPCSTPHPPDSLLSLPPSVTPTLPDPQALLTPQQQLSLPVMTIPLPTMRTSIT
TGTSSSQVMANPAGLNFLNVVGSVCSPQTLMTSSQMLGPGLNLSGLGGLMPTTQSVAILT
PPSAAAANGYGGTGPQGASPRLHTASQSKM
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagttttggaatatgcattggatcgggctgagtacattgttgaaagtgctcgt
caacagccagccaagaggagagcgttgtccggagggaggaagagtctatatcagaaacta
tacgagctctacatcgaagagtgtgacaaagaaccagagctcaagaagctgcgtaggaat
gtcaacctgctggagaagctggtgtctcaggagtcagtgtcttgtctggtggttaacctt
taccccggcaaccagggatactccctcatgctcctcggcaagaatggatccgactctgag
acgatccgtctgccatatgaggaaggacagctgttggagtacctggatgccgaggagctt
cctcctgtcctggtggatctcttagagaagtcccaggtgaacatcttccactgtggctgt
gtggtagctgaggtccgagactacagacagtctggcaacactaagatgccctccttccag
agcagacacgtcctgctacgacccaccatgcagacactgatctgtgatgtccatgccatg
accagtgacccccacaaatggacacaggatgataagttccagttggagagccagttactg
ctggccacagctgatcctctgtgtctggatccatctatctctgtcacctgtacagccaac
cacctgctctataacaagcagaagatgaacactcactctatgaaacgttgttttaagcat
cactctcgggcggcgctgaaccgtcagcaggagctgtcctacctgcccacgcccccccag
ctgcgtctctatgactacctgcagaggaggaaggagaggaagccggccccctcgatagac
ctgaagatctccaaagccggaaaatgtgtggacatgtggaaacagagccgctgccaactc
actgtccccaaggagattgatgtagagaaatatgcagtggtagagaagtcagtgaagttg
caggaatctcagcccactgtctggcctgcagaggaagtgatagatgactatacgtttaag
tgtgaggtcgggggccagaggaccacggtgtccatcttccagtcggtgggcgatcctctg
gtctacggaaagatctactgcgctgaggaagacagcagcgaccttcacctcgtacatcca
gcgttcctaataggctcaaagagagatgctgatcggtttctatcccagtataaaggtgtg
tatgagcaggacgtgaagtgccaggtgaaaatgtctcggaactcaggcatcatgggacag
aaccaactctcagccagtagagagacagagcccgttgtgtgtccccaggtggatggtcta
tcagccttggttcagtcgtcaggtgtgttggggaagggggtgaagcaccggcctcccccc
atcaaactaccctccgggtcgggcagcagctcttcaggtaacctgtatagttcagcccag
gccaccagtggtctccttaagtgtcttacgccccccccaggatcaggccccggctcagcc
aagccccagtctctgagtaggaagcactctgtggagctgggggggcagttaggacaggtg
gggttgttgtccccggcagccctatctcccatggcgtcgacacagagatcggggaccccg
aagccgtccacccccaccaacaccccgtgttccacccctcacccccccgactccctcctt
tccctccctccctccgtcacccccacccttccggacccccaggccctcctgaccccccag
cagcagctgtccctccccgtaatgaccatccctctacccaccatgagaacctcaatcaca
acaggaaccagctcctctcaggtcatggctaaccctgctggactcaacttcctcaacgtg
gtgggatctgtctgcagtccccagactctgatgacttccagtcagatgttgggtcctggt
ctaaacctgagtggtctgggaggactgatgcctaccacacagtcagttgcaattcttaca
ccaccaagtgcagcagcagcaaatggctatggggggacgggccctcagggggcgtcgcca
cggctacataccgccagccaatccaagatgtaa
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