Oncorhynchus gorbuscha (pink salmon): 124015540
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Entry
124015540 CDS
T07892
Name
(RefSeq) xylosyltransferase 2-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ogo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ogo01100
Metabolic pathways
Module
ogo_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124015540
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124015540
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124015540
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
124015540
Glycosyltransferases [BR:
ogo01003
]
O-Glycan biosynthesis
Glycosaminoglycan
124015540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
124015540
NCBI-ProteinID:
XP_046186772
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All DBs
Position
LG26:37415558..37430298
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AA seq
884 aa
AA seq
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MNTRIGKMVASVRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLP
DHNSQDPKREAVAWERQNVLSGRSGARWNSRLERTGATAASALRRGTKRRGKHTIRVKVP
LGQGVAVDGVPPHDPSSSRNFTDTRGGGEGVARLPPPVMPGEPGSVEGAPQAPSSDFVPK
CDIMGKDALSALHRAGSRQCRQEIANIVCQHQAGQLMPRALPQFCPLHGFSSPVQTADEL
DNDLSKVENPVRVAFVLVVHGRAIRQLKRLIKAIYHRDHFYYIHVDKRSNYLHREVQQIA
QQYPNVRATPWRMVTIWGGASLLKAYLHSMQDLLSMLDWNWDFFINLSATDFPTRTNDEL
VAFLSQHRDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDW
FSLTRRFVEYVINSQDELVAGLKQFYTYALLPAESFFHTVLGNSPMCDSLVDNNLRVTNW
NRKLGCKCQYKHIVDWCGCSPNDFKPQDLVRIQQLTRPTFFARKFESTVNQEAIHILDTH
LYGHYAPGTVAIKAYWESLFELADGVGSLSDVALTAYSSFFRLGLRSLESSQTSLETCRY
EPIGYPVSVHLYFYDERFQGYLVRQEVQKVGSRVRETVEVWAVPQATMQLENNLREFERL
KNLEVGTEWDPKERIFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDI
SVDVDAEYTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGREPLRQEEDSW
LHAGPPGNLYLEQGFQQLRSVLKLPPQEPALQEAQQRAQLVGKPLEAWVDRTVGAFWVTG
DLCSTLPSPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaacactagaattggaaaaatggtggccagcgtcagagtgcagaagctcctccgacga
tacaaactagcgattgccgccgcgttaacgattcttctgattcaagggctagtagtatgg
agtctgagaagtctcgaagagggcgaggcggagaggaaaacgcggcggtctaagctacct
gaccacaacagccaggaccccaaaagggaggcggtggcctgggagagacagaatgtcttg
tctgggaggagtggggcccgatggaacagcaggctggagaggacgggggccacggctgcc
agcgccctccggaggggcaccaagcgccgggggaagcacaccatcagggtgaaggtgccc
ctgggccaaggggtagcagttgatggcgttcccccacatgacccctccagcagccgtaac
ttcactgatacccggggtggaggggagggggtggccagactaccccctccagtcatgcca
ggggaaccgggcagcgtggagggggcaccccaagcccccagcagcgactttgtgcccaag
tgtgacatcatgggcaaggacgccctgtcggccctgcaccgcgccggctcgcggcagtgc
cggcaggagatcgccaacattgtgtgccagcatcaggccgggcagctcatgccaagggca
ctgcctcagttctgtccgctgcacggtttttccagcccggtccagacagctgatgagctg
gacaatgacctgtccaaggtggagaacccggtcagggtggccttcgtcctggtggtccac
ggccgggccatcaggcagctcaaacgcctcatcaaagccatataccaccgagaccacttc
tactacatccacgtggacaagcgttccaactacctgcatcgggaggtgcagcagattgct
cagcagtaccccaatgtgcgtgccacgccctggcgcatggtgaccatctggggcggtgcc
agcctgctgaaggcctaccttcacagcatgcaggacctgctctccatgctggactggaat
tgggacttcttcatcaacctcagtgccactgacttccccaccaggaccaacgatgaactg
gtggcttttctgtcacagcacagagaccagaacttcctcaagtcacatgggcgggagaat
gcgaggttcataaagaagcagggtctggaccggctgttccatgagtgtgacaaccacatg
tggcggctgggtgagcgaaccatcccagagggcctggaggtgtctgggggctctgactgg
ttctccctcaccaggcgcttcgtagagtatgtcatcaactcccaagatgagctggtggcg
ggcctgaaacagttctacacctacgccctgctccccgctgagtccttcttccacacagtg
ctgggaaacagtcccatgtgtgactctctggtggacaacaacctgcgtgttaccaactgg
aacaggaagcttggctgtaagtgccagtacaaacacatagtggactggtgcggctgctct
cccaacgacttcaaaccacaggacctcgtcaggatacagcaactgacccggcccacgttc
tttgcccgaaagtttgagtccacggtgaaccaagaggctatacacatcctggacacccac
ctgtatggacactacgccccagggacagtggccatcaaggcctactgggagagcctgttt
gagctggcggacggggtgggctccctcagtgacgtggccctcacggcctactcttccttc
ttccgcctgggcctcaggagcctggagagcagccagaccagcctggagacctgcaggtat
gagccaataggctacccggtgtcggtgcacctgtatttctacgacgagcgtttccagggc
tacttggtccgtcaggaggtgcagaaggtggggtcaagggtcagggaaacggtggaggtg
tgggccgtgcctcaggccaccatgcagctggagaacaacctccgggagtttgagaggctc
aagaacctggaggtgggcacagagtgggaccccaaggagagaatattccggaacttcggt
ggtgtgatcgggccgctagacgagccggtggcggtacagaagtgggttcgggggcccaac
ctcactgccaccattgtgtggatcgaccccgcccagacggtggcggcgtcttatgacatc
agtgtggatgtggacgcagagtacacgcagtacaagcccccgctgcagcggccgctccgc
cccggggcctggacagtcagggtgctgaggctgtgggagcgtgtggctgaggctcgcttc
ctcgtcatgcccctggccttcaaaggacgagagccactacgccaagaggaggacagctgg
ctgcacgcggggccaccaggcaacctgtacctggagcagggcttccagcagctgagatct
gttctgaagctgcccccacaggagcctgccctgcaggaggcccagcagagggcccagctg
gtgggcaagcccctggaagcctgggtggaccgcacagtgggggccttttgggtgaccggg
gacctgtgctccaccctgccttccccgggcccctgcccttccctgggcccctgtaccaag
tccacctggagctccctcgccccagaccctaagtcagaacttggccctgtcaaaggtgac
ggccggatcaggtag
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