Oncorhynchus gorbuscha (pink salmon): 124015584
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Entry
124015584 CDS
T07892
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124015584
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
124015584
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
124015584
Prokaryotic type
124015584
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Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
124015584
NCBI-ProteinID:
XP_046186882
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All DBs
Position
LG26:complement(39032364..39040884)
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AA seq
870 aa
AA seq
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MFSMTKVSLHCKSIAWLFVRHTPTGCLQSFACSEHLFQFLRTMSTNTTDNQHRGSKKPRA
PKETLRHVKSREQRKRGVDVHGPATVYAQVVGAGSRDNGASLYVFSEFNRYLFNCGEGTQ
RLMQEHKLKAARLDNIFLTRMSWENVGGLSGMILTLKDTGVPEVVLSGPPQLEKYVNAIR
VFSGPLEEIKLAVRPYTEKQYTDDTMTVSQIPIFAQLREDGPKCSRNSGRSSPSSSPQRR
ELWRPEDSEDTSTDSRKERATSPGGKAKATRDPSLVVAFICKLHPKKGNFLVAQAKSLGL
PVGTAAIGPLIAALKDGKSVTYEGREIHPEEVCTPTDPGPAFIVVECPSEEFVQPICIDQ
QLSRYQRGGTEDPAALVVHMSPESVLKTDEYKQWMERFPSTTEHLILNEQVCTVHNVRSH
KIQTQLNLIHPEIFPELQHYKTKETQAALHVPNVRAECLLKFQLRPKIEWQRDAIPSCDT
EEFVKEAAEAPNFLQEVEECKRFRATDAAVLSGRAEKYPEVVFLGTGSALPMKIRNVSGN
LVNISATQSVLLDCGEGTFGQLCRHYGDSVDETLAKISTVFISHMHADHHTGLLSLLFQR
ERALATLGKAFSPIYLIAPVQMMTWLNQYHDHCEEILSHVNIVPSKVMCEGAEVSKFKTK
AFIQALLKKSDLAKFQTCPVRHCKNAFACSITHQSGWQLVFSGDTMPCDALAHMGKNATL
LIHEATLEDGLEDEAVEKRHSTTSQAIGIGMKMNAEFIMLNHFSQRYAKIPLFSEDFNDR
VGISFDHMRIRFGDFRILPRLIPPLKALFAEEIGEMEERRGRRELKQMKGVIAESNEEQR
TPNEGETGKGAKREPEEPTQDVGSKRLKTN
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtatgactaaagtgtctctacactgtaaatctattgcatggctatttgtgaga
cacacacctacgggttgcctacaaagcttcgcatgcagtgaacatctttttcagtttctg
cggacaatgtctacgaacacaacagacaaccaacatcggggatcaaagaaacccagagca
cccaaagaaacattgcgacatgtgaagtctagagaacagaggaaacgtggagtggatgta
catggaccagccactgtctacgcgcaggtcgtcggggcagggagccgagataatggcgct
tcactttatgtcttctctgagttcaataggtacctcttcaactgtggtgagggaacacag
aggctgatgcaagagcacaagttaaaagctgctcgcttggacaatattttcctcactaga
atgagctgggagaatgttggtggtctatcagggatgatattgacactgaaagacactggt
gtccctgaggttgttctctctggaccaccacaactggagaaatatgtgaatgccatcaga
gtattttctggaccactggaagaaatcaagctagctgttcgaccttacaccgagaaacaa
tacacagatgacacaatgacagttagtcaaataccaatatttgcccagctcagagaggat
gggccaaagtgctcccgtaactcagggaggagcagcccctccagtagtccccagaggagg
gagctgtggaggccagaagactctgaggacaccagcacagacagcaggaaggagagagca
accagcccaggtggaaaagcaaaagcaacaagggatccttctttagttgtggcattcatt
tgtaagcttcatcctaagaaggggaacttcttggttgctcaagcaaaaagccttgggtta
ccagtaggcactgcagctattggtcctctcattgcagctctgaaggatgggaaaagtgtt
acctacgaaggaagagagatccatcctgaggaggtgtgcactcccactgatccaggacca
gccttcattgttgtggagtgtccctctgaggagtttgttcaaccaatctgcatcgatcag
cagctgagcagataccaacgtggaggaacagaggaccctgctgccttagtagtccacatg
agccccgagtctgtgctgaaaacagatgaatacaagcaatggatggaaaggtttccatct
accacggagcacctgatcctgaatgaacaagtttgcactgttcacaacgtcaggagccac
aagattcaaactcagcttaatctgattcatccagagatatttccagagctccagcactat
aaaacaaaggagacccaggctgccctgcatgtccccaatgtcagagccgagtgtcttctg
aagttccagctcagacccaagattgaatggcaaagagacgccatcccctcttgtgacact
gaagagtttgtgaaagaggctgcggaggcccctaacttcctccaagaagtggaggagtgc
aagcggttccgtgcgactgatgctgcagtgctgtctgggcgggcagaaaaatacccagag
gtggtctttttaggaactggatcggctcttcctatgaagatcaggaatgttagtggtaac
ttggtcaacatcagtgccactcagtcagtgctgctggactgtggagagggcacctttggc
cagctgtgccgacactatggggacagtgtggatgagacactggcaaagatctcaaccgtc
ttcatctctcacatgcatgcggaccatcacacaggattgttgagtttgctgtttcaaaga
gagagagctttggcaactcttgggaaagccttcagccccatctatctgatagcccctgtc
cagatgatgacctggctcaaccagtaccatgaccactgtgaggagatcctcagccatgtc
aacattgtccctagcaaagtcatgtgtgagggggctgaggtgtccaagttcaaaaccaag
gcattcatccaagcgctgctgaagaaatctgatttagcaaagttccagacttgtccggtg
cgtcactgtaagaatgcctttgcctgcagcatcactcaccagtctggctggcagctagtc
ttctctggggacacaatgccttgcgatgccctcgcacatatgggaaagaatgcaacttta
cttattcatgaagccacattggaagatggattggaggacgaggctgtggagaagagacat
agtactacctcccaggccatcggtattggcatgaagatgaatgctgagttcatcatgctg
aaccacttcagccagcgctatgccaagatccccctcttcagtgaggacttcaacgacaga
gtgggaatatcttttgaccacatgaggattcggtttggagactttagaatcctccccaga
ctcatcccgcccctcaaagccctgtttgccgaggagatcggagagatggaggagaggaga
gggaggagggagcttaaacagatgaaaggagtcattgctgaaagcaacgaagagcagagg
acacccaatgaaggcgagacgggcaaaggtgccaaacgagagccagaggaaccaacacag
gacgtgggaagtaagagactcaaaacaaactaa
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