Oncorhynchus gorbuscha (pink salmon): 124015646
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Entry
124015646 CDS
T07892
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124015646
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
124015646
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GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
124015646
NCBI-ProteinID:
XP_046186972
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Position
LG26:37743264..37748051
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AA seq
522 aa
AA seq
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MADQNKTSAKVEFGNELLNPPELFEARTRSHKIPVRGQKDFIPTGSDQQRDRLQQSLDEH
WNLVSEERVERLGNLVKAVWIPSDMIVELQSPAGKFWQTMGFSAHGKQCLHPEEALYLME
CGNLQVFYQDLPLSIQEGYERFLYSKTMSVQHYQVFGHLKRLGYVVNRFDPSSVPSQYER
QLNLPQSRDSSGKLWKRKRSHSPTSTHTGTQEGPTSKRMEEEKDCNREEEDKNPDSLPDL
SAPDIDEIQTASHVDPTTSTVGGQGRSWWSKKGSPDPDSELPGQPQSSPRWDFSSIPFPD
LGSRCWLPSSLTSPDPCLLPGAVGSVGACDVAPWLQRLNLREVRMSRREWERERDRDRYR
RDINQDREVRRCRNWAEYQELQERRIQRSRRDRPVHLWEGPVTPLHDPAQVTSTGELLDK
ISVIKSTRLLEGTSSLKGSEEWGICFNIYQPDTVAEFKKSTPGKPYSRMCVCSFDGPVPD
LWTLKMLAFQSGDVPVTYAVVDHGDISFYSFKDFQIPTDVSF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaacaaaacatcagctaaagtagaattcggcaatgaattactaaaccca
cctgagctgttcgaagcccgcacgcgcagccacaagatcccggtgcgcgggcagaaggat
ttcattcccacagggtcggatcagcaaagggataggcttcagcagagtttggacgagcac
tggaatctagtatctgaggagcgagtggagaggttggggaacctggtgaaggcagtgtgg
attcccagtgacatgatagtggagctgcagtcaccagcagggaagttttggcagactatg
gggttttctgcccatggtaagcaatgtctacatccagaagaggctctctatctaatggag
tgtggaaacctgcaagttttctaccaagacctgccactgtccatccaagagggttatgag
agatttctatactcaaagacaatgagtgtacagcattaccaggtatttggccatttgaag
cgacttggttatgtggtgaacagatttgatcccagttctgtaccatcgcagtatgagagg
cagttgaacctgccccagtcccgagacagctcaggaaaactttggaagaggaaacgcagc
cacagccccacctccacgcacacaggaacacaggagggccccacttctaagagaatggag
gaggagaaagactgcaacagagaggaagaggacaagaatcctgactctcttccagatctt
tcagccccagacattgacgaaatccagacagcatcacacgttgaccccaccacttcaact
gtgggtggccagggcaggagctggtggtcaaagaaaggctccccagaccctgactctgag
ctgccaggtcagccccagagctcccctcgctgggacttcagctccatccccttcccagac
ctgggctccagatgctggctccccagcagcctgacctccccagacccctgcctgctgccc
ggggctgtggggtcagtgggggcctgcgatgtggccccctggctgcagaggctcaacctg
cgggaggtgaggatgtcccggcgtgagtgggagagagagcgggatagggaccggtaccgg
agggacatcaaccaggacagagaggtacgacgttgcaggaactgggcggagtaccaggag
ctacaggagagaaggattcaacggagccgcagagataggccagtacacctgtgggagggg
ccggtcacacccctacatgaccctgcacaggtcacttcaactggtgagctgctggataaa
atcagtgtgatcaaatccacacggctgctggagggaacatccagtttgaaaggttcagag
gagtggggaatctgtttcaacatttaccaacccgacacagtcgctgaattcaagaagagc
actcctggaaaaccctattctcgcatgtgtgtgtgcagtttcgatggtccagtgcctgac
ttgtggacactgaaaatgctggctttccagagtggggacgtcccggtcacctatgcagtg
gtggaccacggggacatctccttctactccttcaaggacttccagatacccacagatgtg
tccttctga
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